Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01697 ATGATGGAAAGTGGTGGAAGAGAAGGGTTTGATGGAGTGATGATGACGATGACAAGAGACCCGAAGCCAAGGTTAAGGTGGACAGCCGATCTTCACGACCGGTTTGTCGATGCTGTCACAAAGCTTGGTGGCCCTGATAAGGCAACTCCTAAGTCTGTTCTAAGGTTAATGGGATTAAAAGGTTTGACATTATATCATTTGAAGAGCCATTTACAGAAGTATAGACTTGGACAACATGCTCAAAAACAAAATGAAGAACAGTACAAAGAGAATAATAGATGTTCGTATGTAAATTTCAGTAACCATTCTACAGGGACCAATACCAGTTATGGATGTGACAATGAAGGGGGAGAAATCCCAATAGGAGAAGCACTAAGGCAACAAATTGAAGTTCAAAAGAGATTAGAAGAGCAACTTGAGGTACAAAAGAAATTGCAAATGAGAATAGAGTCTCAAGGGAAGTATTTGCAAACAGTGTTAGAGAAAGCACAAATGAGTCTTTCACAAGATGAACAAGGCAATCTTGAAGCATCAAAAGCTCAATTAGCTGAATTCAATTCAGCTTTATCAAATTTCATGGAAAATATGAACAAAGATAGTAAAGAAAACATTGTAGACATAAATGGATTTTATAATAAGAATTATAGCTCAGCTTTCAATTATCAAGAATCAAGAATTACTAGAAACAGAAGAAAATAA 699 0.3619 MMESGGREGFDGVMMTMTRDPKPRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQKYRLGQHAQKQNEEQYKENNRCSYVNFSNHSTGTNTSYGCDNEGGEIPIGEALRQQIEVQKRLEEQLEVQKKLQMRIESQGKYLQTVLEKAQMSLSQDEQGNLEASKAQLAEFNSALSNFMENMNKDSKENIVDINGFYNKNYSSAFNYQESRITRNRRK 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01697 232 NCBIfam myb-like DNA-binding domain, SHAQKYF class 22 77 IPR006447 GO:0003677
Trre9g01697 232 SUPERFAMILY Homeodomain-like 22 78 IPR009057 -
Trre9g01697 232 Gene3D - 21 80 - -
Trre9g01697 232 Pfam Myb-like DNA-binding domain 25 75 IPR001005 -
Trre9g01697 232 FunFam Myb family transcription factor 21 79 - -
Trre9g01697 232 Coils Coil 175 195 - -
Trre9g01697 232 Pfam MYB-CC type transfactor, LHEQLE motif 120 165 IPR025756 -
Trre9g01697 232 Coils Coil 125 152 - -
Trre9g01697 232 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 79 IPR017930 -
Trre9g01697 232 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 13 200 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01697 Trre-Chr9 15052545 15055420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01697 15 191 G2-like Transcription Factor Family AT3G24120 53.439 8.79e-58 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Trre9g01697 DUF3617 6.8e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01697 - - mtr:11409568 400.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g01697 9 15052545 15055420 Trre9g01697 9 15052545 15055420 ECH