Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01686 ATGGCTGCCCCAACATCAACCTCTCTCTTGAGAATAGAGAATATACCTAACAAAGGTAGAGGCCTTATTGCAGCACAAGATCTCAAAGCTGGCCAAATAATCCTCACTGAATCCCCTCTCCTTCTCTACTCTGCTTCACCTCTCTTCTCTCCTACACCCTCCCCTTACTGTCACCACTGCTTCAGAACCTTACAACCTTCACAAACATTTACATGTCCTTCTTGCTCAAACTACAATTTCTGCAGCCAAAAATGTCTCTCCATTGCTCTCAATTCCTCTCACTCACCTTGGACATGTCAAACACTCTCTCATCTTCAAAACCCCACTTCACCATTATTAGAAAAACCCTTTGAACTTCAAGTCCAAGCTCGTTTTATTGTAGCTGCTTACAATCTTGCTATTCACACCCCTTCAATTATTCAAATTATACTTTCTCTTCATGGTGATACTAATGATCATTATTCTATAGTTGATAATGCTAAGTTTCTTCATTCTCTTATTTCACCTTTTTGTCCACCAAACATGAACAACTTATCAGCTGAATTAGCTGCAAAACTCATTGCCAAAGAAAGATTAAACTCTTTTTGCTTAATGGAACCTTATTCACCAAAGGGTCCTCAAAGATCTATTAAGGCTTATGTAATTTACCATAAAGCCACTTTTTTTAACCATGATTGTATTCCAAATGCATGCAGGTTTGATTATGTGGAAAATGGTGAACCTGGTGATGAACATAATACTGATATTGTTATTAGGTTGATTAAGGATGTTTCTGTTGGAAGTGTAAGATTGAAGCAAATTGGAATGATGGAGAGAATAACAGTGATCTGCCACATGTGA 840 0.3786 MAAPTSTSLLRIENIPNKGRGLIAAQDLKAGQIILTESPLLLYSASPLFSPTPSPYCHHCFRTLQPSQTFTCPSCSNYNFCSQKCLSIALNSSHSPWTCQTLSHLQNPTSPLLEKPFELQVQARFIVAAYNLAIHTPSIIQIILSLHGDTNDHYSIVDNAKFLHSLISPFCPPNMNNLSAELAAKLIAKERLNSFCLMEPYSPKGPQRSIKAYVIYHKATFFNHDCIPNACRFDYVENGEPGDEHNTDIVIRLIKDVSVGSVRLKQIGMMERITVICHM 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01686 279 ProSiteProfiles SET domain profile. 8 268 IPR001214 GO:0005515
Trre9g01686 279 SUPERFAMILY SET domain 9 260 IPR046341 -
Trre9g01686 279 Gene3D - 56 108 - -
Trre9g01686 279 Gene3D - 109 194 - -
Trre9g01686 279 Pfam SET domain 19 260 IPR001214 GO:0005515
Trre9g01686 279 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 1 260 IPR044238 -
Trre9g01686 279 Gene3D SET domain 21 260 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01686 Trre-Chr9 14961085 14962021 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Trre9g01686 SET 4.7e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01686 - - cam:101515628 365.925