Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01669 ATGTTTGAATGCATAAGAAGTTGTACAAAGCAAAGATCAGAAGATGGAGATGATGAAGAAGGTGTCCGTCAGAGTGGCACGCCGACCACTAAACCAGCCGTCAAAAGCCTGACTGCACAGATTAAGGACATGGTGCTGAAGTTAAAGGGTGCTGACAAAAGTGGTTCTAGTCCTTTCAGCAAAGGACTGAAATCATCTACCAATTCTGAAGGGGTTCAATACCCTTACATGGGAGGATTAAGCTCAGGTTCAACTCCTCCGTGGGACTTAAGCGCTAATTTTTCCGGTGGAAGATCAGACCAAAGGTTTATAGGGGGAACTAGTGGTAACCAAACCCCTAGAGTGCAAGAGCCAGTTGTAGCTGCAGCTCCTAAGGCAGTGGTGGAGGAGGTAGATGGAAACAAAGTGTGGGTGGCACAGGTGGAGCCGGGGGTTGATGTTACCTTTGTGTCTCTTCCTGATGGTGGAAACGATCTCAGGAGAATTCGTTTCGACCGAGATATGTTCGATAAGTGGCAAGCTCAAGTATGGTGGGGAGAGAATTTTGACAGGCTAAGGGAGCTTTATAATGTCCAGACATTCAATCGTCAAGCTCTTAACAACACTACTCCTCCACCATCTGAAGATGAGCAGAGAGATTCTTCTGCTTATTGGAGGCTTCATACTGGAGGAGATACCCCTATGGCTGGATGGTTCAATGATTCAGCAGAAAGGAATCAATACTATAATCCTGCAAGATTCACTATGGGACAAGGAAGCAGTAGCCACCAACAATTCCATGCAGCTGGATCATCCATGGAAGTATCAAGGACTTCTTCTAAAGATGAGCTTTCCTTCAGCAATGCAAGTGATATTGAATCGGAATGGTTGGAGCAAGTTGAGCCTGGAGTGTTTGTTACAATCAGACAGTTACCTGATGGGAACAAGGAGATTCGTCGTATCAGATTCAGCCGACAGAGGTTTGGAGATGAAGAAGCAAGGAAATGGTGGGAAGACAACAGAGAAAGAGTGAATGCTCAATTCCTGTGA 1029 0.4568 MFECIRSCTKQRSEDGDDEEGVRQSGTPTTKPAVKSLTAQIKDMVLKLKGADKSGSSPFSKGLKSSTNSEGVQYPYMGGLSSGSTPPWDLSANFSGGRSDQRFIGGTSGNQTPRVQEPVVAAAPKAVVEEVDGNKVWVAQVEPGVDVTFVSLPDGGNDLRRIRFDRDMFDKWQAQVWWGENFDRLRELYNVQTFNRQALNNTTPPPSEDEQRDSSAYWRLHTGGDTPMAGWFNDSAERNQYYNPARFTMGQGSSSHQQFHAAGSSMEVSRTSSKDELSFSNASDIESEWLEQVEPGVFVTIRQLPDGNKEIRRIRFSRQRFGDEEARKWWEDNRERVNAQFL 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01669 342 ProSiteProfiles BRX domain profile. 135 190 IPR013591 -
Trre9g01669 342 Pfam Transcription factor regulating root and shoot growth via Pin3 286 340 IPR013591 -
Trre9g01669 342 Pfam Transcription factor regulating root and shoot growth via Pin3 136 189 IPR013591 -
Trre9g01669 342 MobiDBLite consensus disorder prediction 1 36 - -
Trre9g01669 342 Pfam Transcription factor BRX N-terminal domain 27 48 IPR027988 -
Trre9g01669 342 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 342 IPR044532 -
Trre9g01669 342 ProSiteProfiles BRX domain profile. 287 342 IPR013591 -
Trre9g01669 342 MobiDBLite consensus disorder prediction 8 24 - -
Trre9g01669 342 MobiDBLite consensus disorder prediction 50 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01669 Trre-Chr9 14614233 14618346 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01669 1 342 Major Intrinsic Protein MIP AT1G31880 47.632 1.99e-97 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01669 - - mtr:11415593 422.165