Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01616 ATGGCCAGAGCTTTAGATTTCATTAAAGATATCAACGATGGAAAAGAACTTTGGAAATTTGCTGTCCGGCTGGAAGATATTTGGAAAACTGGTATAGGGAAAGGTGAATACTTGGAGTTTATCATTCTGGACAAACAGGGAGATAACATTCAGGTTGTTCTTCCATCTGATCTTTGCCCTTTGTTTGAGTCTAAACTTGAAGAAGGAGCCACATACATTATGAAAAATTTTAAAGTTCAGCCAAATGATTTGAAGGTCAAATTTTGTGATCACCCTTTCACATTGGTTGGATTTGCCGGTGACGGAGGATCTGATATTATTCCAACAAAGATACCAAACATTCCCAAATATAAGTTTAATTTCAAATCTTTTGATGATATCAAACATGACAAGTACCGCGCTGATCTGTTAGTAGATATCATAGGTGTTGTGCATGAGGTTAAATCGGATAAAAAATCATTTGGGACAAAGAAACTCCCAACTACCTTTTCTTTAGCTGATGCCTCGATGAACATACTTACATGCTCTCTATGGGGTAAGTATCAAACCGAATTTCTTTCTTGCCAAATACAACGAGAATGCCTGTGGAGGTCTAGTAATTGTCATTCTTAA 612 0.3676 MARALDFIKDINDGKELWKFAVRLEDIWKTGIGKGEYLEFIILDKQGDNIQVVLPSDLCPLFESKLEEGATYIMKNFKVQPNDLKVKFCDHPFTLVGFAGDGGSDIIPTKIPNIPKYKFNFKSFDDIKHDKYRADLLVDIIGVVHEVKSDKKSFGTKKLPTTFSLADASMNILTCSLWGKYQTEFLSCQIQRECLWRSSNCHS 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01616 203 SUPERFAMILY Nucleic acid-binding proteins 119 185 IPR012340 -
Trre9g01616 203 CDD RPA1_DBD_A_like 22 93 - -
Trre9g01616 203 Gene3D - 5 99 IPR012340 -
Trre9g01616 203 SUPERFAMILY Nucleic acid-binding proteins 7 96 IPR012340 -
Trre9g01616 203 Gene3D - 113 195 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01616 Trre-Chr9 14116200 14117275 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01616 33 181 Core DNA Replication Machinery Family AT5G45400 25.153 1.56e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01616 - - tpra:123891620 131.724