Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01608 ATGAAAAAGAGGGAAAAGATTAAACGATGGAACAATATCCTCACACCATCGTTCTCCTTCCCAATTCCACCGTCATCGCCCACAACAGAAAAAGAAAAAGATCCCATTTTTAAGGTTGAATTTGGCCATTCATCCATGGCTGACGTTCTTTCACAAAAGATCAAAACACCCACAAGCACCAACAAGAAGGAAACATCAAATCTTTTACTGGGTCGATTCGAAATTGGGAAACTTCTTAGTCATGGAACATTTGCTAAGGTTTATTATGCCAGGAACATCAAAACTGGTGAAGCTGTTGCAATCAAAGTCATTGACAAGGAGAAGAATCTGAAGGGAGGTTTAGTTGCTCATATCAAACGTGAGATCTCGATTCTTCGTCGTGTTCGTCATCCTAATATTGTTCAATTGTTTGAGGTAATGGCTACTAAAACAAAGATCTAA 441 0.3878 MKKREKIKRWNNILTPSFSFPIPPSSPTTEKEKDPIFKVEFGHSSMADVLSQKIKTPTSTNKKETSNLLLGRFEIGKLLSHGTFAKVYYARNIKTGEAVAIKVIDKEKNLKGGLVAHIKREISILRRVRHPNIVQLFEVMATKTKI 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01608 146 ProSiteProfiles Protein kinase domain profile. 73 146 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g01608 146 SUPERFAMILY Protein kinase-like (PK-like) 56 144 IPR011009 -
Trre9g01608 146 FunFam Aurora kinase A 65 146 - -
Trre9g01608 146 Gene3D Phosphorylase Kinase; domain 1 61 146 - -
Trre9g01608 146 Pfam Protein kinase domain 74 145 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g01608 146 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 61 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01608 Trre-Chr9 14071340 14071780 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01608 50 146 CBL-interacting serine-threonine protein kinases AT4G18700 74.747 7.13e-43 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Trre9g01608 Pkinase 5.3e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01608 - - gmx:100814720 168.318