Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01606 ATGTACGGTGGTGGAGGAGTCGGAGACGATGCTCTGGCCGCTCGCTTAGGGATGATAACGCCGTCGCTACTAATTCCGACGACGTCGATGATTTCCCGGGAGATATCTCCGGCGCCGGCGAGAGATGAGAGGCTTCCAACTCAGCTGCAGTGGAGTCAGCAGGAAACGAGAGAGTTCATAGCTATACGAGCAGAGCTTGAGAGAGACTTCACTGCTTCGAAGAGGAACAAGACGCTTTGGGAAGTGGTGAGTTCAAAGATGAGAGAGAGAGGGTATAGAAGAAGTCCTGAACAATGTAAATGTAAATGGAAGAATCTTGTTAATCGCTATAAGGGAAAAGAGACATCTGATCCAGAGCATGGCAGGCAATGTCCATTTTTTGAAGAGTTGCATGCTGTTTTTACTGAAAGAGCACATAACATGCAACGGTTGCTTCTTGAATCTGAAACTCGTTCAGCTCAAACAAAGAAAGGAGTGAAAAGAATAAGAAGTGGAGATCGATCCTCAGAGGAATTCTCAGAAGATGATGAGGAAGTTGAAGACGACAGTGAAGAGGAGAGACCTGCAAGAAGCAATACCCGTAAAAGGAAAGCTGGCAAAATTGCAACGGAGAAGTCTTCAAGAGCAAACAATGCAAGCAATAGTAATATTCAGGAAATGCTGAAGGAATTTTTCCAGAACCAACTAAGGATGGAAATGCAGTGGAGGGAAATGATGGAAAGACGTGCACATGAAAGGCAGTTGTTTGAACAAGAATGGCGGCAGTCAATGGAAAAGCTTGAGAGGGAGAGATTAATGATTGAACAGGAATGGAGGGAGAGAGAAGAACATAGGAGACTGAGGGAAGAGAGTAGGGCAGAGAGAAGGGACGCTTTGTTGACAGCCCTTTTAAACAAACTCATTCACGAATCTAACTAA 918 0.451 MYGGGGVGDDALAARLGMITPSLLIPTTSMISREISPAPARDERLPTQLQWSQQETREFIAIRAELERDFTASKRNKTLWEVVSSKMRERGYRRSPEQCKCKWKNLVNRYKGKETSDPEHGRQCPFFEELHAVFTERAHNMQRLLLESETRSAQTKKGVKRIRSGDRSSEEFSEDDEEVEDDSEEERPARSNTRKRKAGKIATEKSSRANNASNSNIQEMLKEFFQNQLRMEMQWREMMERRAHERQLFEQEWRQSMEKLERERLMIEQEWREREEHRRLREESRAERRDALLTALLNKLIHESN 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01606 305 Coils Coil 250 270 - -
Trre9g01606 305 Gene3D - 51 112 - -
Trre9g01606 305 FunFam Zinc finger and SCAN domain-containing 20 51 112 - -
Trre9g01606 305 MobiDBLite consensus disorder prediction 153 170 - -
Trre9g01606 305 MobiDBLite consensus disorder prediction 185 203 - -
Trre9g01606 305 MobiDBLite consensus disorder prediction 146 215 - -
Trre9g01606 305 PANTHER FI21293P1 47 302 - -
Trre9g01606 305 ProSiteProfiles Myb-like domain profile. 51 107 IPR001005 -
Trre9g01606 305 CDD GT1 50 114 - -
Trre9g01606 305 SMART sant 47 109 IPR001005 -
Trre9g01606 305 Pfam Myb/SANT-like DNA-binding domain 50 132 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01606 Trre-Chr9 14045968 14047835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01606 34 305 Trihelix Transcription Factor Family AT2G38250 44.727 1.02e-50 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Trre9g01606 Myb_DNA-bind_4 2.7e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01606 - - gmx:100812635 428.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g01606 9 14045968 14047835 Trre9g01606 9 14045968 14047835 ECH