Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01593 ATGGGTAAAGTATTTGGTTGGTCTTCTGGTCTTGCTCTTATGTATCTTCCAATCTCTCTTGTTATGTTTATTGCCGCTTCTATGGGTCTTGTTGGTTATGGTCTTCAATTTCTTCTCATCAATAACTTCATCTCTTTGCCTTATTTTGTGGTTTTTCTTCTGTGTCTGTTAAGTGGCTGCAGCATATGTTGGTTCAACACAGTATGTTTTGTTCTCTGCATAAAAAATTTCCCAGTTAACAGACCCTTAGCATTATCACTCACAGTGAGTTTCAACGGTGTAAGTGCAGCACTCTACACTCTCGCCGCGAATTCAATAAACCCTTCATCAGATAATCTCTATCTTCTTTTAAATGCCCTTGTTCCTCTTCTCACTTCCATTGCAGCATTACTTCCAATCCTTCGCCAACCGCCTTTATCAGACACTCATTCACCACACGCCGCTCGCCACAACTCGGTTATATTTCTTACATTGAACATTTTAGCAGTTTTCACTGGCCTTTATCTTCTTATATTTGCCTCATCAACTTCTGATGAAGCCACATCAAGATTTTACTTTGGTGGAGCTCTTGTACTTTTAATCTCGCCGCTATGTATTCCTGGTGTTATATATGCTAGAGATTGGTTTCACCGCACTGTTCATTCGAGCCTTCGAGTTGAAAACACCGGCTTCATTCTTGTTCATGTTGATGATCTTGAGCTTCATAAAGAACTACTTACGCGTCAAAATAGCGCTCGTAATGTCAGCAATGGAGATAATCAAAGCCTACTTGGTGAAAATGGATATGGAATTCAAAGGGCAAAAAGTAGTGATGTGAATTGTGACAAGTTTTTTGTACAGGATCAGTTGGAAATGCTGGGAGAAGAACATTCAGCCGCGGTTCTCGTAAAACGGTTGGATTTTTGGCTTTACTATGTTGCATACTTCTGTGGAGGTACTCTTGGTCTTGTTTACAGCAATAATCTTGGACAGATAGCTCAATCTTTAGGCCACAGTTCAAGAACGTCGACCCTTGTCACGCTATATTCATCGTTTTCTTTCTTTGGCCGTTTGCTTTCAGCTACGCCGGACTACATTCGAAACAAGATCTACTTTGCGAGAACAGGATGGCTAACCATTGCACTAATACCAACACCGATTGCATTCGTCTTGCTGGCTTCATCAGATAGTGCCGCGGCACTTAATATAGGCACTGCGCTAATCGGTTTGAGCTCAGGTTTCATATTTGCAGCTGCAGTGGCGGTTACATCTGAGCTATTTGGACCTAACAATCTTAGTGTCAATCACAACATTCTTATTACAAATATTCCAATTGGATCCCTTCTCTATGGTTTTATGGCTGCATTAGTTTATGATGCTAATGCTATCTCGGCACCTGGAAACGGAAACATAATAATGTCCGATTCGTTAGTGTGCATGGGAAGACATTGCTATTTCTGGACATTTGTATTGTGGGGATGTATATCTGTCATAGGATTAGTTTCTAGTTTGCTGTTATTCTTAAGAACCAAACATGCTTATGAGTGTTTCGAGAGACACCGTATTTCAGCACAATCGACTGTGTCTTGA 1569 0.4073 MGKVFGWSSGLALMYLPISLVMFIAASMGLVGYGLQFLLINNFISLPYFVVFLLCLLSGCSICWFNTVCFVLCIKNFPVNRPLALSLTVSFNGVSAALYTLAANSINPSSDNLYLLLNALVPLLTSIAALLPILRQPPLSDTHSPHAARHNSVIFLTLNILAVFTGLYLLIFASSTSDEATSRFYFGGALVLLISPLCIPGVIYARDWFHRTVHSSLRVENTGFILVHVDDLELHKELLTRQNSARNVSNGDNQSLLGENGYGIQRAKSSDVNCDKFFVQDQLEMLGEEHSAAVLVKRLDFWLYYVAYFCGGTLGLVYSNNLGQIAQSLGHSSRTSTLVTLYSSFSFFGRLLSATPDYIRNKIYFARTGWLTIALIPTPIAFVLLASSDSAAALNIGTALIGLSSGFIFAAAVAVTSELFGPNNLSVNHNILITNIPIGSLLYGFMAALVYDANAISAPGNGNIIMSDSLVCMGRHCYFWTFVLWGCISVIGLVSSLLLFLRTKHAYECFERHRISAQSTVS 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01593 522 Gene3D MFS general substrate transporter like domains 300 521 IPR036259 -
Trre9g01593 522 Pfam Nodulin-like 1 200 IPR010658 -
Trre9g01593 522 SUPERFAMILY MFS general substrate transporter 16 505 IPR036259 -
Trre9g01593 522 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01593 Trre-Chr9 13949268 13953446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01593 1 520 Nodulin-like Gene Family AT1G31470 56.046 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01593 - - gmx:100814771 807.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g01593 9 13949268 13953446 Trre9g01593 9 13949268 13953446 ECH
Trre9g01593 9 13949268 13953446 Trre15g02432 15 20193207 20198833 PCT