Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01586 ATGGAGAAAACAAGATTAGGCCAATGGTTAAACCTTCTGGTGTTTGTACTGGTATGGCTGAAGGCAGAAGCTGCTTATGTACCAATCACTTATGTCCACAACGCGGTGTTAAAAGGAGCCGTTTGTTTGGATGGTAGTCCACCAGCTTATCATTTAGATAAAGGATTTGGAACAGGAATTAACAGTTGGTTAGTTCAATTTGAGGGAGGAGGATGGTGCAATAATGTCACTACTTGCCTTGGTCGCAAGACGAATCGTTTAGGTTCATCTAAGAAAATGGCTAATCAAATTGCATTTTCAGGAATTTTAAATAGCAGGAGACAGTATAATCCAGATTTCTACAATTGGAACAGAATCAAGGTTCGATATTGTGATGGTTCATCTTTTACTGGCGACGTAGAAGCAGTCAATCCAGTAACAAAATTGCACTTCAGAGGAGCAAGAGTTTTCAATGCTGTTATGGAGGAGTTGTTAGCAAAAGGAATGAAAAATGCTCAAAATGCTATTATCTCAGGATGTTCAGCTGGTGGATTGACTTCAATACTTCATTGTGATCGCTTTCGAGCTCTTTTACCGAGTAGAGCTAGAGTGAAATGTCTCTCAGATGCTGGTTACTTTATCAACGCAAGGGATGTATCTGGAACACAACACATTGAACAATTCTTCAGTCAAGTTGTTACAACACATGGGTCTGCAAAGAATTTGCCTAAATCATGCACTTCAAGACTCAGTCCAAGGCTGTGTTTTTTCCCTCAATATGTTGTATCACAAATCACTACACCAATCTTCTTTGTAAACGCGGCATATGACTCATGGCAGATTAAGAACATTTTGGCGCCGGGTGTAGCTGATCCTCAAGGACACTGGCATAGCTGCAAGCTAGATATAAACAACTGCTCTTCTAATCAACTTGATCTAATGCAAGGCTTTAGAACACAATTTCTAAGAGCATTGACTGTTCTAGGAAACTCTCCATCCAAAGGAATGTTCATCGACTCTTGCTATGCTCACTGTCAAACTGAAATGCAAGAATCATGGTTTCTAAGTGACTCTCCATTGTTGGCCAAGACAACCATTGCACAAGCTGTAGCAGACTGGTTTTTCGAAAGAAGGCTTTTCCATCAGATAGATTGTCCTTACCCTTGCAATCCGACTTGTCCGAACCGTGCTTTTGAACCAGAAGACAACCCAGGAAAAAATGTGACTACCAAAGGAACTTCATCAGGTGCATCAGCTATAAAGCCAAGTTTTCAAAAACTATCAAACAAGGCACAATGGATTGAACTTTTATGTTGTGGAACCAGTTGGCTTCTACTAACGTTGTTTATTCTGACAGATTCGGCAGAAGAATCTTTAGAATGCTGCATCTGA 1371 0.4034 MEKTRLGQWLNLLVFVLVWLKAEAAYVPITYVHNAVLKGAVCLDGSPPAYHLDKGFGTGINSWLVQFEGGGWCNNVTTCLGRKTNRLGSSKKMANQIAFSGILNSRRQYNPDFYNWNRIKVRYCDGSSFTGDVEAVNPVTKLHFRGARVFNAVMEELLAKGMKNAQNAIISGCSAGGLTSILHCDRFRALLPSRARVKCLSDAGYFINARDVSGTQHIEQFFSQVVTTHGSAKNLPKSCTSRLSPRLCFFPQYVVSQITTPIFFVNAAYDSWQIKNILAPGVADPQGHWHSCKLDINNCSSNQLDLMQGFRTQFLRALTVLGNSPSKGMFIDSCYAHCQTEMQESWFLSDSPLLAKTTIAQAVADWFFERRLFHQIDCPYPCNPTCPNRAFEPEDNPGKNVTTKGTSSGASAIKPSFQKLSNKAQWIELLCCGTSWLLLTLFILTDSAEESLECCI 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01586 456 PANTHER NOTUM-RELATED 10 388 IPR004963 GO:0016787
Trre9g01586 456 Pfam Pectinacetylesterase 21 371 IPR004963 GO:0016787
Trre9g01586 456 SUPERFAMILY alpha/beta-Hydrolases 142 272 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01586 Trre-Chr9 13831363 13838255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01586 5 397 Carbohydrate Esterase AT4G19420 63.551 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01586 K19882 - gmx:100776478 756.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g01586 9 13831363 13838255 Trre9g01586 9 13831363 13838255 ECH
Trre9g01586 9 13831363 13838255 Trre15g02438 15 20248074 20251021 PCT
Trre15g02437 15 20236843 20240619 Trre9g01586 9 13831363 13838255 PCT