Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01573 ATGGATATGCTGCACAGTGGAATGGATGGGATGTCAATGCCACCAAAATCATCTACAAATGGTAGTACCATGATGATGGATCATAATAAGATGATGCATATGACATTCTTCTGGGGAAATGATGCTTTGATTCTCTTCAATGATTGGCCTGCTGGTAAACCTGGTAATTATTTGTTGGCATTGTTCATGGTTTTTGCCATGTCTGTACTCATCGAGTTACTCTCTTATCACACCCGCTTCATCAAACCGGGTTCCAACCCTATGGTGGTTCGTTTAGTTCAGACACTTTTGCATGTTCTTAGGGTTGGATTAGCTTATTTGGTTATGTTGGCACTTATGTCTTTTAATGGTGGTGTGTTCTTAGTTGCTGTGCTTGGTCATGCTCTTGGATTCTTCTTTTGTAAGTAA 408 0.402 MDMLHSGMDGMSMPPKSSTNGSTMMMDHNKMMHMTFFWGNDALILFNDWPAGKPGNYLLALFMVFAMSVLIELLSYHTRFIKPGSNPMVVRLVQTLLHVLRVGLAYLVMLALMSFNGGVFLVAVLGHALGFFFCK 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01573 135 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 23 134 IPR007274 GO:0005375|GO:0016020|GO:0035434
Trre9g01573 135 Pfam Ctr copper transporter family 89 134 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01573 Trre-Chr9 13712952 13713359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01573 35 131 Inorganic Solute Cotransporters AT5G59030 50.000 1.01e-26 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01573 K14686 - gmx:100306175 179.874