Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01561 ATGGATCAACAAGAAGAAGTCACTACACCTTCTAAGAAAAAAGAAGTTATTACAGCCGCTAATTCTGGTTCCGTGAAAAAGCGTGTTGTCGACGACAACAATGCGAATGAAACTGCCTCTAAACGCTCTAAGAAGAAAGAAGTTGTTATAGCCGCTAATTCGGGAAGAATTTTCAGTGAAAAACACGGTCGTGTTATTCAGAATGGCATGATTGAATTTATTTCCAAAACTGGAAACAATCCTTTTAAGGATTCAAAGGCTTTTCACAATTTTATGAAGAATTCGATTGGTGCTGAGATCAGTACCAAACAACTAAAACGGAAGGTTCGTGACTTTAAGGAGAAGTTTGGAAGAGGAAAATGGAAATACGATGATAAGACATATTTTGGATTTTAA 396 0.3636 MDQQEEVTTPSKKKEVITAANSGSVKKRVVDDNNANETASKRSKKKEVVIAANSGRIFSEKHGRVIQNGMIEFISKTGNNPFKDSKAFHNFMKNSIGAEISTKQLKRKVRDFKEKFGRGKWKYDDKTYFGF 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01561 131 MobiDBLite consensus disorder prediction 25 46 - -
Trre9g01561 131 MobiDBLite consensus disorder prediction 1 20 - -
Trre9g01561 131 MobiDBLite consensus disorder prediction 30 46 - -
Trre9g01561 131 Pfam Protein of unknown function, DUF573 56 118 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01561 Trre-Chr9 13596372 13596767 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01561 3 116 GeBP Transcription Factor Family AT1G61730 33.621 2.31e-12 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Trre9g01561 DUF573 1.9e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01561 - K14766 tpra:123884067 103.605