Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01535 ATGCAAAATAGCACAGTTGGAATAAAGGGGACTATTGGTTATGCTCCTCCAGAGTATGGAATGGGATCTAAGTTGTCGATTGAAGGCGACATGTATAGCTTCGGAATTCTAGTTTTAGAAATGTTAACCGGAAGAAGACCTACCGATGAAATGTTTGAAGACAGTCATGGTCTTCACAATTTCGTTAAAATTTTGATTTCAAATGATCTTTTGCAGATTGTAGACCCAACCATTGTCCACAATGAATTGGAACGAGCTACTGACAGTGAGAATCTTGGCGTTATGGAATCTAATGCAGAGAAATGCCTATTTTCGCTTTTTAGTATTGCACTTGCTTGTTCAATGGAATCACCGAAAGAAAGAATGAGTATGGTTGAAGTCATAAGAGAGCTTAATATAATCAAAAGTTTCTTTCCTACTGAGGGTTTAATGGAAAAATCTGCATTACAAACACAAAAAGTATGA 465 0.3656 MQNSTVGIKGTIGYAPPEYGMGSKLSIEGDMYSFGILVLEMLTGRRPTDEMFEDSHGLHNFVKILISNDLLQIVDPTIVHNELERATDSENLGVMESNAEKCLFSLFSIALACSMESPKERMSMVEVIRELNIIKSFFPTEGLMEKSALQTQKV 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01535 154 ProSiteProfiles Protein kinase domain profile. 1 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g01535 154 SUPERFAMILY Protein kinase-like (PK-like) 4 134 IPR011009 -
Trre9g01535 154 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 4 135 - -
Trre9g01535 154 Gene3D Transferase(Phosphotransferase) domain 1 1 144 - -
Trre9g01535 154 Pfam Protein tyrosine and serine/threonine kinase 9 131 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01535 Trre-Chr9 13336179 13336724 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01535 1 141 Receptor kinase-like Gene Family AT3G47110 44.755 1.69e-30 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Trre9g01535 PK_Tyr_Ser-Thr 3.1e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01535 - - gmx:100792724 220.32