Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01527 ATGGACAGGACATCAATTCTTGGAGATACAATTGATTGCATGAAAGAGCTTCTAGAAAGGATTAGTAAGTTGCAAGAAGAAATGGACGAAGAAGGAACAAATCAAATAAACCTTTTGGGAATTTCTAAGGAGTTAAAGCCAAATGAAGTAATGGTAAGAAATTTCCCCAAGTTTGATGTTGAGAGGAGAGACCAAGACACAAGGATTAGTATCTGCTGTGCTACAAAGCCAGGATTATTACTATCAACTGTGAACACATTGAAAGCATTAGGCCTTGAGATTCATCAGTCTGTTATAAGCAGTTTCAATGATTTTTCATTGCAAGCATCTTGCTCAGAGGTAAATGGACAGAGAAATTGTAAGAATCCTGAAGAGATCAAGCGATCACTATTCAAGGATGCAGAGAAATTGTATGAACCTGAAGAGATAAAGCAATCACTATTCAGGAATGCAGGTTATGGTGGGAGATGTCTCTAA 477 0.3732 MDRTSILGDTIDCMKELLERISKLQEEMDEEGTNQINLLGISKELKPNEVMVRNFPKFDVERRDQDTRISICCATKPGLLLSTVNTLKALGLEIHQSVISSFNDFSLQASCSEVNGQRNCKNPEEIKRSLFKDAEKLYEPEEIKQSLFRNAGYGGRCL 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01527 158 Coils Coil 11 34 - -
Trre9g01527 158 CDD ACT_UUR-ACR-like 67 108 - -
Trre9g01527 158 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01527 Trre-Chr9 13275292 13278682 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01527 1 158 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 54.430 2.35e-46 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01527 - - gmx:100784145 237.654