Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01498 ATGGTGAGTGACCATTGGAAGGCCCATTTGGGCATGGCAGTGGTACAGGTATTCAATGGTGGCTACCATGTTATTACCAAAGTAGCCCTTAATGCTGGAGTTAACCAATTAGTCTTCTGCTTTTATAGGGATCTCCTTGCTCTCTTCATTCTTTCTCCCATAGCTTTCTTCAAAGAAAGACAGACAAGGCCACCCATTACTAAACAGCTACTTATGACATTCTTCTTTCTTGGATTAACTGGGATATTTGGAAACCAGCTGTTGTTTCTTATTGGTTTAAGTTATACTAATCCAACTTATGCTGCTGCTTTACAACCTGCTATTCCTGTCTTTACCTTTCTGCTTGCTGTGATTATGGGTGTAGAAAGAGTGAACTTGCAGAGTTTTGAAGGTCTAGCAAAGGTTGGAGGAACTATTGTATGTGTTTCGGGTGCCATATTGATGGTTTTGTATCGCGGTCCATCTTTGATAGGTTATACAGAACTAATCATTATACCACAGAGTGAAATAAAAGATATTGGAATAGATAATTTTCAACTTGGAGTTGTGTTCTTGATAGGAAACTGCATGTGCATGGCTGCTTTCCTAGCCATCCAGGCACCGGTATTAAAAAAGTATCCTGCAAATCTATCATTGACAGCATATTCATTCTTCTTTGGAGTTGTACTAATGGCGATAGTCTCGTTATTCATGACTGATTTGTCAAGTGACTGGATTTTGACACAATCAGAAATACTTGCTGTTGTTTATGCTGGAACTATTACATCTGCCTTTAACTATGGAGTTATTAGTTGGTGCAACAAGATATTGGGACCAGCTTTAGTTGCCCTATACAATCCACTTCAACCTGGTTTTTCTGCCCTTCTGTCTCAGATATTCCTTGGAAGTCCAATTTACCTTGGAAGTATCATAGGGGGATCTTTGATCATTGCTGGTCTTTATACTGTTACCTGGGCATCCCATAAAGAAAGACAAGCAACTGTTGAAATTACTTCTGATGGCTCTTTGGTCTCTGAACCACTTATTATTCATGAAAAAAGTGCACACCGAACCTTATCTCTGCAAGCGGAGAAGTTGTTTTCAAGATTTGAACACATTACTTCTATATCACAAGATATCAACCTCAAACACATGATTTGA 1140 0.3895 MVSDHWKAHLGMAVVQVFNGGYHVITKVALNAGVNQLVFCFYRDLLALFILSPIAFFKERQTRPPITKQLLMTFFFLGLTGIFGNQLLFLIGLSYTNPTYAAALQPAIPVFTFLLAVIMGVERVNLQSFEGLAKVGGTIVCVSGAILMVLYRGPSLIGYTELIIIPQSEIKDIGIDNFQLGVVFLIGNCMCMAAFLAIQAPVLKKYPANLSLTAYSFFFGVVLMAIVSLFMTDLSSDWILTQSEILAVVYAGTITSAFNYGVISWCNKILGPALVALYNPLQPGFSALLSQIFLGSPIYLGSIIGGSLIIAGLYTVTWASHKERQATVEITSDGSLVSEPLIIHEKSAHRTLSLQAEKLFSRFEHITSISQDINLKHMI 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01498 379 PANTHER WAT1-RELATED PROTEIN 10 327 IPR030184 GO:0016020|GO:0022857
Trre9g01498 379 Pfam EamA-like transporter family 9 135 IPR000620 GO:0016020
Trre9g01498 379 Pfam EamA-like transporter family 180 317 IPR000620 GO:0016020
Trre9g01498 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 151 - -
Trre9g01498 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 217 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01498 Trre-Chr9 12777548 12780335 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01498 4 251 Nodulin-like Gene Family AT3G45870 63.462 1.16e-111 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01498 - - gmx:100793730 509.22