Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01493 ATGGGAAGTGACACATGGAAAGCTCATTTGGGCATGGCAGTTGTGCAACTACTATATGGTGGTTACCATGTTATTACAAAAGTGGCCCTTAATGTTGGAGTCAACCAACTTGTTTTCTGCTTCTATAGGGATCTTCTTGCTCTCTTCATTATTTCTCCCATTGCTTTCTTCAAAGAAAGACAGACAAGGCCTCCCATTACTAAGAAACTATTGTTGTCATTCTTCTTTCTTGGATTAACCGGGATATTTGGAAACCAGCTGTTGTTTCTTATTGGTTTAAGTTATACTAATCCAACTTATGCTGCTGCATTACAGCCAGCTATTCCAGTCTTTACCTTTCTCTTTGCTGTAATCATTGGTGTAGAAAGAGTAAATTTGAAGAGTTTTGAGGGTCTGGCAAAGGTTGGAGGAACTCTTATATGTGTTTTGGGCGCAGTATTGATGGTTTTGTATCGCGGACCATCATTGATAGGATATTCAGAATTGGTCACTATACCACAAAATGAAATAAGTGACAGTGGTCAGCTAAAGCCTTCTGGATGGTTGATCAGTGGTTTAAAGGATCTTGGATTTGATAATTTTGAACTTGGAGTTGTGTTCTTGATAGGGAACTGCATGTGCATGGCTGCTTTCTTAACCATTCTGGCACCGGTATTGAAAAAGTATCCTGCAAATCTATCTGTGACAGCATATTCATTTTTCTTTGGAGTTGTACTAATGGCGATAGTCTCGTTATTCATGACTGATTTGTCAAGTGACTGGATTTTGACACAATCAGAAATACTTGCTGTTGTTTATGCTGGAACTATTGCATCTGCCTTTAACTATGGAGTCATTAGTTGGTGTAACAAGATATTGGGGCCAGCTTTAGTTTCCCTTTACAATCCACTACAACCTGGTTTTTCTGCCCTATTGTCTCAGATATTCCTTGGAACTCCAATTTACTTGGGAAGTATCATAGGAGGATCTTTGATCATTGCTGGTCTTTATACTGTTACTTGGGCTTCTTATAAAGAAAAACATGCAACTGTTGGAATTGTTACTTCTAATGACTCTTGGGTCTCTGAACCATTTGTTCGTGAAAAAGGTGTACACGAAAAAGATCACATATAA 1113 0.3845 MGSDTWKAHLGMAVVQLLYGGYHVITKVALNVGVNQLVFCFYRDLLALFIISPIAFFKERQTRPPITKKLLLSFFFLGLTGIFGNQLLFLIGLSYTNPTYAAALQPAIPVFTFLFAVIIGVERVNLKSFEGLAKVGGTLICVLGAVLMVLYRGPSLIGYSELVTIPQNEISDSGQLKPSGWLISGLKDLGFDNFELGVVFLIGNCMCMAAFLTILAPVLKKYPANLSVTAYSFFFGVVLMAIVSLFMTDLSSDWILTQSEILAVVYAGTIASAFNYGVISWCNKILGPALVSLYNPLQPGFSALLSQIFLGTPIYLGSIIGGSLIIAGLYTVTWASYKEKHATVGIVTSNDSWVSEPFVREKGVHEKDHI 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01493 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 338 - -
Trre9g01493 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 152 - -
Trre9g01493 370 Pfam EamA-like transporter family 196 333 IPR000620 GO:0016020
Trre9g01493 370 Pfam EamA-like transporter family 9 149 IPR000620 GO:0016020
Trre9g01493 370 PANTHER WAT1-RELATED PROTEIN 10 340 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01493 Trre-Chr9 12735586 12740621 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01493 91 359 Nodulin-like Gene Family AT5G45370 59.926 4.32e-113 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01493 - - gmx:100793730 546.969