Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01492 ATGGCAATGGGAAGTGACACATGGAAAGCTCATTTGGGCATGGCAGTTGTGCAACTACTATATGGTGGTTACCATGTTATTACAAAAGTGGCCCTTAATGTTGGAGTCAACCAACTTGTTTTCTGCTTCTATAGGGATCTTCTTGCTCTCTTCATTATTTCTCCCATTGCTTTCTTCAAAGAAAGACAGACAAGGCCTCCCATTACTAAGAAACTATTGTTGTCATTCTTCTTTCTTGGATTAACCGGGATATTTGGAAACCAGCTGTTGTTTCTTATTGGTTTAAGTTATACTAATCCAACTTATGCTGCTGCATTACAGCCAGCTATTCCAGTCTTTACCTTTCTCTTTGCTGTAATCATTGGTGTAGAAAGAGTAAATTTGAAGAGTTTTGAGGGTCTGGCAAAGGTTGGAGGAACTCTTATATGTGTTTTGGGCGCAGTATTGATGGTTTTGTATCGCGGACCATCATTGATAGGATATTCAGAATTGGTCACTATACCACAAAATGAAATAAGTGACAGTGGTCAGCTAAAGCCTTCTGGATGGTTGATCAGTGGTTTAAAGGATCTTGGATTTGATAATTTTGAACTTGGAGTTGTGTTCTTGATAGGGAACTGCATGTGCATGGCTGCTTTCTTAACCATTCTGGCACCGGTATTGAAAAAGTATCCTGCAAATCTATCTGTGACAGCATATTCATTTTTCTTTGGAGTTGTACTAATGGCGATAGTCTCGTTATTCATGACTGATTTGTCAAGTGACTGGATTTTGACACAATCAGAAATACTTGCTGTTGTTTATGCTGGAACTATTGCATCTGCCTTTAACTATGGAGTCATTAGTTGGTGTAACAAGATATTGGGGCCAGCTTTAGTTTCCCTTTACAATCCACTACAACCTGGTTTTTCTGCCCTATTGTCTCAGATATTCCTTGGAACTCCAATTTACTTGGGAAGTATCATAGGAGGATCTTTGATCATTGCTGGTCTTTATACTGTTACTTGGGCTTCTTATAAAGAAAAACATGCAACTGTTGGAATTGTTACTTCTAATGACTCTTGGGTCTCTGAACCATTTGTTCGTGAAAAAGGTGTACACGAAAAAGATCACATATAA 1119 0.3852 MAMGSDTWKAHLGMAVVQLLYGGYHVITKVALNVGVNQLVFCFYRDLLALFIISPIAFFKERQTRPPITKKLLLSFFFLGLTGIFGNQLLFLIGLSYTNPTYAAALQPAIPVFTFLFAVIIGVERVNLKSFEGLAKVGGTLICVLGAVLMVLYRGPSLIGYSELVTIPQNEISDSGQLKPSGWLISGLKDLGFDNFELGVVFLIGNCMCMAAFLTILAPVLKKYPANLSVTAYSFFFGVVLMAIVSLFMTDLSSDWILTQSEILAVVYAGTIASAFNYGVISWCNKILGPALVSLYNPLQPGFSALLSQIFLGTPIYLGSIIGGSLIIAGLYTVTWASYKEKHATVGIVTSNDSWVSEPFVREKGVHEKDHI 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01492 372 PANTHER WAT1-RELATED PROTEIN 12 342 IPR030184 GO:0016020|GO:0022857
Trre9g01492 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 340 - -
Trre9g01492 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 154 - -
Trre9g01492 372 Pfam EamA-like transporter family 11 151 IPR000620 GO:0016020
Trre9g01492 372 Pfam EamA-like transporter family 198 335 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01492 Trre-Chr9 12735586 12740627 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01492 93 361 Nodulin-like Gene Family AT5G45370 59.926 2.97e-113 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01492 - - gmx:100793730 546.969