Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01461 ATGACTTCTTTTACACACCATAGAAGTATTATTGTCTTCTTTAATCTTTTTCTTGCAGTACTTGTTGCAAATTCTATCTTTTGCTTTTCTGATAAGGTTTATGTAGTGTACATGGGAAGCAAAAGTAGTGATCAAGACCCAGATGAAATTCTGAATCATAATCATCAAATGCTTACAGAAGTTCATAGAGGAAGTGTTGAACAAGCACAAGCTTCACATATTTATAGCTACAAACATGGTTTCAAAGGCTTTGCAGCAAAACTCACTGATGAACAGGCTTACCAAATTTCAAAAATGCCGGGAGTGGTTTCGGTGTTCCCCAATTCTAAAAGAAAGTTGCATACTACTCATTCATGGGACTTCATGGGACTTTTGGATGATGAAACAATGGAGAATAAGGGCTACTCAACCAAAAACCAAGCAAATGTCATTATTGGTCTCATTGATACAGGAATTTGGCCTGAATCCCCGAGCTTTAGAGACACTGACATGCCACCGGTGCCACGTGGATGGAAAGGCCATTGTCAAAAAGGAGAAGCTTTCAATGCTTCATCTTGCAACAGGAAAGTAATAGGAGCAAGATACTATATGAGTGGATATGAAGCAGAAGAAGGATCAGACAAAAAAGTCTCTTTCAGATCTCCAAGAGACAGCTCTGGTCATGGAAGTCATACAGCATCCACAGCAGCAGGACGATACGTGGCAGACATGAATTATAAGGGGTTGGCATCAGGAAAAGCAAGGGGAGGTGCACCTATGGCTAGAATTGCTGTTTACAAAACATGTTGGGATTCTGGTTGCTATGATGTGGACTTGTTAGCTGCCTTTGATGATGCCATACGAGACGGTGTTCACATTATATCTTTATCTCTTGGTCCTGAAGCTCCTCAAGGTGACTATTTCAATGATGCCATATCTGTGGGATCTTTCCATGCTGCTAGACATGGAGTGCTTGTAGTAGCATCATCTGGAAATGAAGGAACTGTTGGTTCTGCAACAAACCTTGCACCATGGATTATCACTGTTGCTGCTAGCTCAACAGATAGGGATTTCACCTCTGATATTCTGTTAGGAAATGGTGTTCACATCACGGGTGAGAGTCTCAGTCTATTCGAAACGAATGCATCCAGAAGAATAATTCCTGCATCTGAAGCCTTTGCGGGATATTTTACTCCTTATCAATCCAGTTACTGTTTAGATAGCTCACTAAACAAGACCAAGACCAAAGGGAAGATTTTGGTGTGTAGACATGATGAGGGTACAATGGCATCAAAATTGGAAAAAAGTAAGGTAGTGAAAGAGGCAGGTGGAGTTGGGATGGTACTCATTGATGAAACAGATCAAGGTGTTGCCATTCCATTTGTGATACCTTCGGCTATTGTTCAAAGGAAAACAGGAGAACAGATTCTATCCTATATCAATAGCACACGCATACCTATGTCAAGGATTTCCGGGGCAAAGACAGTAGTAGGAGTTCAGCCTGCACCGCGTGCAGCAGCATTTTCTTCCAAAGGCCCCAATTCCTTAACCCCAGAAATTTTGAAGCCTGATGTTTTAGCTCCCGGGTTAAACATCCTAGCAGCATGGTCTCCAGCAGCAGCTGGAAACATGAAGTTCAATATTCTATCAGGAACTTCTATGGCTTGTCCTCATGTTACTGGAATTGCAGCCTTTATCAAAGCCGTGCATCCTTCATGGTCTCCATCTGCTATCAAATCGGCCATCATGACTACTGCAACAATTCTGGATAAGCACAATGAACCGATTAGAGTGGATCCTGATAGAGGAAGGGCTAATGCATTTGAATATGGATCAGGGTTTGTGAACCCTGCAAAAGCACTGGAGCCTGGTCTTGTATATGACTCACAGCCTGAAGATTTTGTTGCATTCTTGTGTTCAATTGGTTACGATGAGAAGTCACTCCATCTCGTTACAAGAGACAACAGCACATGTGATGGGGCATTCAAATCACCATCTGACCTCAACTATCCATCTATTGCAGTTCCAAATCTTGAAGACAACTTTTCAGCAACTCGAGTTGTGACTAATGTTGGAAAAGCTAGAAGTATATATGAAGCTGAAGTATTGTCTCCAGCTGGAATTAATGTTACTGTTGTGCCAAACCGGCTAGTATTCACAAGAACAGGACAGAAAATTAAGTTTACTGTGAATTTCAAAGTGATCGCTCCCTTAAAGGGATATGCGTTTGGGTTCTTAACATGGAGGAACAGAATATCACAGGTCACCAGTCCTTTAGTTGTTAAGGTTGCAACAGCAAGCCTTGGGTTGGTCAGATAA 2298 0.4178 MTSFTHHRSIIVFFNLFLAVLVANSIFCFSDKVYVVYMGSKSSDQDPDEILNHNHQMLTEVHRGSVEQAQASHIYSYKHGFKGFAAKLTDEQAYQISKMPGVVSVFPNSKRKLHTTHSWDFMGLLDDETMENKGYSTKNQANVIIGLIDTGIWPESPSFRDTDMPPVPRGWKGHCQKGEAFNASSCNRKVIGARYYMSGYEAEEGSDKKVSFRSPRDSSGHGSHTASTAAGRYVADMNYKGLASGKARGGAPMARIAVYKTCWDSGCYDVDLLAAFDDAIRDGVHIISLSLGPEAPQGDYFNDAISVGSFHAARHGVLVVASSGNEGTVGSATNLAPWIITVAASSTDRDFTSDILLGNGVHITGESLSLFETNASRRIIPASEAFAGYFTPYQSSYCLDSSLNKTKTKGKILVCRHDEGTMASKLEKSKVVKEAGGVGMVLIDETDQGVAIPFVIPSAIVQRKTGEQILSYINSTRIPMSRISGAKTVVGVQPAPRAAAFSSKGPNSLTPEILKPDVLAPGLNILAAWSPAAAGNMKFNILSGTSMACPHVTGIAAFIKAVHPSWSPSAIKSAIMTTATILDKHNEPIRVDPDRGRANAFEYGSGFVNPAKALEPGLVYDSQPEDFVAFLCSIGYDEKSLHLVTRDNSTCDGAFKSPSDLNYPSIAVPNLEDNFSATRVVTNVGKARSIYEAEVLSPAGINVTVVPNRLVFTRTGQKIKFTVNFKVIAPLKGYAFGFLTWRNRISQVTSPLVVKVATASLGLVR 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01461 765 Pfam Subtilase family 142 582 IPR000209 GO:0006508|GO:0008236
Trre9g01461 765 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 29 114 IPR037045 -
Trre9g01461 765 FunFam Subtilisin-like protease SBT1.5 142 356 - -
Trre9g01461 765 ProSitePatterns Serine proteases, subtilase family, serine active site. 544 554 IPR023828 -
Trre9g01461 765 CDD PA_subtilisin_like 354 483 - -
Trre9g01461 765 Pfam Peptidase inhibitor I9 33 114 IPR010259 -
Trre9g01461 765 Gene3D Peptidase S8/S53 domain 142 627 IPR036852 GO:0004252|GO:0006508
Trre9g01461 765 Pfam Fibronectin type-III domain 660 754 IPR041469 -
Trre9g01461 765 Pfam PA domain 386 469 IPR003137 -
Trre9g01461 765 MobiDBLite consensus disorder prediction 207 227 - -
Trre9g01461 765 PRINTS Subtilisin serine protease family (S8) signature 543 559 IPR015500 -
Trre9g01461 765 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Trre9g01461 765 PRINTS Subtilisin serine protease family (S8) signature 217 230 IPR015500 -
Trre9g01461 765 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 34 754 IPR045051 -
Trre9g01461 765 FunFam Subtilisin-like protease SBT1.5 631 757 - -
Trre9g01461 765 FunFam Subtilisin-like protease SBT5.3 24 114 - -
Trre9g01461 765 SUPERFAMILY Subtilisin-like 113 618 IPR036852 GO:0004252|GO:0006508
Trre9g01461 765 Gene3D - 348 490 - -
Trre9g01461 765 ProSiteProfiles Serine proteases, subtilase domain profile. 118 614 - -
Trre9g01461 765 Gene3D - 631 757 - -
Trre9g01461 765 CDD Peptidases_S8_3 112 580 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01461 Trre-Chr9 12457717 12461382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01461 34 756 Subtilisin-like Serine Gene Family AT2G04160 43.386 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01461 - - gmx:100780538 1280