Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01441 ATGGCTGCCATGGAAGGAAGAATCTCTGAGGAATTAACGCCTAGGTATTATGCCCTTTGTACCATTGGAGGAATGCTTAGTGCCGGTACCACTCATCTTGCTACAACTCCTCTTGACGTTTTGAAAGTTAACATGCAGGTGCATCCTATTAAATATTACAGTATTTCATCTTGCTTTACTACCTTATTGAGGGAACAAGGGCCTTCTGTCCTTTGGAAAGGATGGACAGGCAAGTTCTTTGGCTATGGTGCTCAAGGAGGATGCAGATTCGGTCTCTACGAATATTTTAAGGGAGTTTACTCTAACGTATTGGTAGACCAGCACAGGAGTCTTGTGTTCTTTCTTAGCAGCGCATCTGCTGAAGTTTTTGCCAATTTAGCTCTATGTCCATTTGAAGCCGTTAAAGTCAGGGTTCAAGCACAACCCAGTTTCGCTAAGGGTATGTTTGACGGGTTTCCGAAGGTATATGCAGCAGAAGGCGCACGAGGATTCTACCGTGGACTTGTTCCACTTTTGGGTCGAAACATTCCATTTTCCATGGTTATGTTCTCAACGTTCGAGCACTCTGTTGATTTTTTATATCGTAATGTTGTCAAAAGAAAAAAGGAGGAATGTTCAAAAGCTCAACAACTTGGCGTGACATGTTTAGCTGGATATACCGCTGGATCTGTTGGTAGCTTTGTTTCTAATCCTGCTGACAATATAGTAGCTTCTCTTTATAACAGAAAAGCTGATAGTCTTCTGCTGGCTATCAGAAAAATTGGACTAGCAAATTTATTTACTAGGAGTCTTCCTATTAGAATGTTGCTGGTTGGTCCTTCCATAACTTTGCAATGGTTTTTCTACGATACCATCAAAGTTTTAGGTGGACTGCCAACTAGTGGTGAAGTTGCACCTGACTTAAGAGGAGATGAGACAGGCTAG 924 0.4199 MAAMEGRISEELTPRYYALCTIGGMLSAGTTHLATTPLDVLKVNMQVHPIKYYSISSCFTTLLREQGPSVLWKGWTGKFFGYGAQGGCRFGLYEYFKGVYSNVLVDQHRSLVFFLSSASAEVFANLALCPFEAVKVRVQAQPSFAKGMFDGFPKVYAAEGARGFYRGLVPLLGRNIPFSMVMFSTFEHSVDFLYRNVVKRKKEECSKAQQLGVTCLAGYTAGSVGSFVSNPADNIVASLYNRKADSLLLAIRKIGLANLFTRSLPIRMLLVGPSITLQWFFYDTIKVLGGLPTSGEVAPDLRGDETG 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01441 307 ProSiteProfiles Solute carrier (Solcar) repeat profile. 108 192 IPR018108 -
Trre9g01441 307 SUPERFAMILY Mitochondrial carrier 16 284 IPR023395 -
Trre9g01441 307 FunFam Mitochondrial phosphate carrier protein 1, mitochondrial 18 289 - -
Trre9g01441 307 Gene3D Mitochondrial carrier domain 19 289 IPR023395 -
Trre9g01441 307 ProSiteProfiles Solute carrier (Solcar) repeat profile. 15 99 IPR018108 -
Trre9g01441 307 ProSiteProfiles Solute carrier (Solcar) repeat profile. 209 288 IPR018108 -
Trre9g01441 307 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 9 299 IPR044677 GO:0005315|GO:1990547
Trre9g01441 307 Pfam Mitochondrial carrier protein 114 196 IPR018108 -
Trre9g01441 307 Pfam Mitochondrial carrier protein 20 101 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01441 Trre-Chr9 12315539 12321456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01441 1 297 Chloroplast and Mitochondria Gene Families AT2G17270 66.779 4.56e-156 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01441 K15102 - gmx:100788561 560.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g01441 9 12315539 12321456 Trre9g01441 9 12315539 12321456 ECH