Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01406 ATGGGAGGCTTATTACACTTTTTTGAATTCAATCAAGGGAGGATGGCTAAGAAAGTCCATGCTCACAAGAGACATCATCATGTTGATTCTGAAACTCCTCGAAATAGTCTAGATCTGCAAGAACAAACATCTCAGAAGTACGGTCCACAAGGAGAATTACCGCACTATTATCAAGTAGAAGAAGACTGGTCTGAAAATAATCGATCTTCAAACGAGGGTTCTATGAAAAAGCTGATTAATGAAGAGCTATCGACACGATCAAGCACCAGGCAAAATGCACCAAGCATTGTGGCAAGGTTGATGGGGATAGATATGATGCCGGTAGACACTAAATATGTCGCTCCATCAGATAAAAGAATAAATGAAAATATCGGGAAGAAGTTTTCAAACAAGGGAACAAATGAAAGAAGTTCAGTTAGTTTGGAATGTTCCAACTTTGATTCTTCTAGCCATGTTGAATTTGATTCATTTCACAAAGTCGTAGAGGATGACAATGATGATGGATGGGGACGGAGTTTTGGAAAACCAATGCGACGAGAACATCCACAGGAAAAAGAACTGCAGAAATTCAAGAAAGAGTTTGAAGCATATCAAGCAGCAAGGTTTCAGGAATGTTCAAAGTTCGCTGAAATCGGAAGTGTATCTAATCGATTGATTTTTCAAGAGAATCTGAACAAGGAAAAGGTTGCAGTTGCAGCGCATAATACAAGTATGCAAAGAAAAGTTTTTCCTTCAAAGAGCAGAACTCTAAGTAGAGACTTTGAAGATTCCTTAATGCTGAAATCTTATAACAGATTAGACACATCTTCTCCAACCCGAATAGTTATCTTGAAGCCTGGTCCTGATAGCATCTTTAATCATGAAGAGAATTGGACCAATTCATCAGGAACTTTACAAGGGAGACATAGTATAGAAGATTTTCTCGAGGAGGTGAAAGAGCGGTTGAAATGTGAACTCCAAGGAAAAACTGTCGGAAAAGGTTTTGCGGTCCGAGGAAGTGAAATTGAGATACTACGCAATAAAAAACCATCGGATCCTAAACTTATCGCTCGTCAAATAGTAAAGCAAGTCAAAGAAAATGTGACTAGAGATTCCGACTCAAATTCTGTCGGCTCAGAATCAACAAGATCATACAATGGTGAAGTGCAGTTCAATGGACCAAGTTTCAATGGATATATCAGTAGAGATTCAAGGAGTTACTTGCCAGAGAAGCTAACAAATGTTGTAAAAAGTGAAAGACATGATGATTCTGAGGGAAACTCAAGATCAAATGCCTTCGAGAATCACAGAGTTAGACTCAAGAAGACAGAAGATGTTTTGAAAAGTGCACATGATTGGGAAATATCGAAAGAAGAAACAGAAATACAAACGGGATCTTTCAGGCATGAACAAGAAAACAACATATTTTTCCATAGGGAGTTATGGTCTCCGAGGAACCTCGTAAGATCCTTTTCTGCTCCTGTATCAAGATCAGGAACATCATTTGGAAAGCTTCTTCTAGAGGACCGACACATTTTAACCGGTGCTCATATTCGGAGGAAGCTTGAAGCTGTTGAAACTATGTCTGTTGATGTTAAAAAACAGAAAAAAGAGAGATTCAATAATATTAAAGAAAAGGTCTCAAATTTTAGATACAGTTTTGCTCTAAGAGGGAGAATTTTTGGCAAGAGGAATCAATCAATGGTAGAATCACATGGCAATGAATACCGTCCAACAATGAGAGATATCACAAGTGGTCCGACAGTTCTTATGAACTGCGGCGGCGAGAGACATGAGAACTACACTGAGGTACCTCCTAGTCCTGCATCTGTGTGCAGCAGTGTTCATGAAGACTTTTGGAAGCGAGCCGAATATATAAGTCCAATATCAACTCCTGATTTGTCGTCAAGAGATGATACCGTTATGCCACAAGTTTTCAGAGACATCAGCTCTGGTTTAAATGAGCTAAGAAGACAACTGAATCAACTCGATTCTGATGATGTTGAGGACTTCGCTATGAAACAAGAACCTTCTGAGTCTGAATTTGTGCAATTAATTGATCCTGCAGAATCTTACATAAGAGATTTACTTGTTGCTTCTGGTCTATACTTTGGTTCTTGGGATAAACCTTTGTTAAGAGGCGACACATATGCAAAGCCTATCGGAAATTCTGTTTTTGAAGAAGTGGAAGAATCTCATAAGAAATTGATCAAGGAGAATGATGAAAATTTTATCAAGAATCATAAGCTAGACCACAGGATTTTGCTTGATTTGTTAAACGAGTCGCTTTCAATTGTTCTTGGACCACCTTTGACATTGTCTAGATTCAGGAAAAAATCATGCAACTCTTCAATGTTAGCGCCGCCTCAAGGAAAGGAACTATTGAAATTAGTATGGGACAATATCCGCGTTTCATTGTATCCTTCATCTGATATATCTCATTATTCACTTGATACTTTGGTGTCTCAACACTTGAGTTCAATACCTTGGTCCGGCAAAATCAACGATGAGATCAATATATTGGAAAGAGAGATAGAATGCCGTATAACTAATGATCTTATCGAAGAACTCACAAAGGATTTGCTCTGA 2568 0.384 MGGLLHFFEFNQGRMAKKVHAHKRHHHVDSETPRNSLDLQEQTSQKYGPQGELPHYYQVEEDWSENNRSSNEGSMKKLINEELSTRSSTRQNAPSIVARLMGIDMMPVDTKYVAPSDKRINENIGKKFSNKGTNERSSVSLECSNFDSSSHVEFDSFHKVVEDDNDDGWGRSFGKPMRREHPQEKELQKFKKEFEAYQAARFQECSKFAEIGSVSNRLIFQENLNKEKVAVAAHNTSMQRKVFPSKSRTLSRDFEDSLMLKSYNRLDTSSPTRIVILKPGPDSIFNHEENWTNSSGTLQGRHSIEDFLEEVKERLKCELQGKTVGKGFAVRGSEIEILRNKKPSDPKLIARQIVKQVKENVTRDSDSNSVGSESTRSYNGEVQFNGPSFNGYISRDSRSYLPEKLTNVVKSERHDDSEGNSRSNAFENHRVRLKKTEDVLKSAHDWEISKEETEIQTGSFRHEQENNIFFHRELWSPRNLVRSFSAPVSRSGTSFGKLLLEDRHILTGAHIRRKLEAVETMSVDVKKQKKERFNNIKEKVSNFRYSFALRGRIFGKRNQSMVESHGNEYRPTMRDITSGPTVLMNCGGERHENYTEVPPSPASVCSSVHEDFWKRAEYISPISTPDLSSRDDTVMPQVFRDISSGLNELRRQLNQLDSDDVEDFAMKQEPSESEFVQLIDPAESYIRDLLVASGLYFGSWDKPLLRGDTYAKPIGNSVFEEVEESHKKLIKENDENFIKNHKLDHRILLDLLNESLSIVLGPPLTLSRFRKKSCNSSMLAPPQGKELLKLVWDNIRVSLYPSSDISHYSLDTLVSQHLSSIPWSGKINDEINILEREIECRITNDLIEELTKDLL 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01406 855 Coils Coil 847 855 - -
Trre9g01406 855 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 854 - -
Trre9g01406 855 Pfam DUF761-associated sequence motif 91 107 IPR032795 -
Trre9g01406 855 Pfam Domain of unknown function (DUF4378) 684 849 IPR025486 -
Trre9g01406 855 MobiDBLite consensus disorder prediction 18 37 - -
Trre9g01406 855 MobiDBLite consensus disorder prediction 359 381 - -
Trre9g01406 855 MobiDBLite consensus disorder prediction 410 429 - -
Trre9g01406 855 MobiDBLite consensus disorder prediction 363 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01406 Trre-Chr9 12007685 12010923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01406 75 854 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 40.368 7.44e-148 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01406 - - gmx:100789616 1177.93