Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01386 ATGGGAATTATTGAAAATGGTAGTAAAGAAGAAGGAAGCACAACTATAAGAGGGGAGTTTCTAGAAATACCAAACTTGGAGGAGTTTAGTTATGGAGATTTGAAAGTTGCCACAAAGAATTTCAAGTCAGATGCATTGTTTGGTGAAGATGGTTTTGGTAAAGTTTTTATAAATCCTGAGACATCAAGAAATTGGTTGAATCCTGAGACACTCACCCATACCAAAACTGGTTTTGGAATGATGGTGGCCATCAAGAAATTGAAATCAGATAGTGTGCAAGGTGTTCAAGAATGGCAGTCAGAAATCAACATTTTAGGAAGGATTTCTCACCCCAATTTAGTCAAGCTATTGGGTTATTGTACAAACGGTGATGAATTTCTCCTTGTGTACGAGTTCATGTCAAGGGGAAGCTTAGAGAGTCATCTCTTTAAAAGAAGTCCTAACTTAGAACCACTTTCATGGAACACTAGACTCAAAATCGCTATTGATGCAGCTCGAGGCCATTTGTATGTGAAGAGCGATGTTTACGGATTTGGTGTGGTGTTGCTTGAAATGTTGACAGGGTTGCAAACACTTGATTTAAAAAGGCTTACAGAGAAGCAAAATCTAGTTGAATGGATTAAGCCTTCTCTTTCTGATAAAAGAAAGTTGAAAGAGGGCGCAGAAAACTCAAATATACATGGAGGGGATGAAGCATAG 699 0.382 MGIIENGSKEEGSTTIRGEFLEIPNLEEFSYGDLKVATKNFKSDALFGEDGFGKVFINPETSRNWLNPETLTHTKTGFGMMVAIKKLKSDSVQGVQEWQSEINILGRISHPNLVKLLGYCTNGDEFLLVYEFMSRGSLESHLFKRSPNLEPLSWNTRLKIAIDAARGHLYVKSDVYGFGVVLLEMLTGLQTLDLKRLTEKQNLVEWIKPSLSDKRKLKEGAENSNIHGGDEA 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01386 232 ProSiteProfiles Protein kinase domain profile. 41 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g01386 232 PANTHER OS01G0588500 PROTEIN-RELATED 167 217 - -
Trre9g01386 232 Gene3D Transferase(Phosphotransferase) domain 1 166 227 - -
Trre9g01386 232 Pfam Protein tyrosine and serine/threonine kinase 74 172 IPR001245 GO:0004672|GO:0006468
Trre9g01386 232 SUPERFAMILY Protein kinase-like (PK-like) 30 206 IPR011009 -
Trre9g01386 232 Gene3D Phosphorylase Kinase; domain 1 25 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01386 Trre-Chr9 11812549 11816287 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01386 167 224 Glycoside Hydrolase AT3G07070 46.552 8.80e-11 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Trre9g01386 PK_Tyr_Ser-Thr 3.7e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01386 - - jre:109007930 212.616