Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01331 ATGATAGCAACGTCATTTGATGTCTCCGCCGTTTGCTTCCATTCAAGTCCTCTAACTCTACGGAAGAAAACGAACATAACAAGTAGTTTTTCGTTTATAAGATCTTCCAACATTAACATGGGACACACAAGTGTTATTGTTCAACCAAAATTTTCAAATTTCCGCACGATGTGTAGTTTAAAGGGGAATTTGGAAGACACTATTGTTGGAGTTCCAACTTCAGTGCCAGTGCGTGTAGCACACGAGCTTCTTCTAGCTGGTCATAAGTATTTGGATGTAAGAACCCCTGAAGAGTTTAATGCTGGACATGCTCCTGGTGCAATTAACATACCTTATATGTATAGAGTTGGATCAGGGATGACAAAGAACAGCAATTTTGTTAAAGAGGTCTCCTCACAATTTAGAAAAGAAGATGAAATTATTGTTGGATGTCAGCTTGGTAAAAGGTCTATGATGGCTGCTACCGACTTGTTAGCTTCGGGATTCACTGGATTAACAGACATAGCTGGTGGTTATGCTGCATGGACCCAAAATGGACTTCCTACAGAACAATGA 555 0.4 MIATSFDVSAVCFHSSPLTLRKKTNITSSFSFIRSSNINMGHTSVIVQPKFSNFRTMCSLKGNLEDTIVGVPTSVPVRVAHELLLAGHKYLDVRTPEEFNAGHAPGAINIPYMYRVGSGMTKNSNFVKEVSSQFRKEDEIIVGCQLGKRSMMAATDLLASGFTGLTDIAGGYAAWTQNGLPTEQ 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01331 184 CDD RHOD 91 175 - -
Trre9g01331 184 Pfam Rhodanese-like domain 90 177 IPR001763 -
Trre9g01331 184 Gene3D - 61 183 IPR036873 -
Trre9g01331 184 SMART rhod_4 74 181 IPR001763 -
Trre9g01331 184 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 70 183 IPR036873 -
Trre9g01331 184 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 4 183 - -
Trre9g01331 184 ProSiteProfiles Rhodanese domain profile. 84 184 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01331 Trre-Chr9 11285579 11287937 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01331 74 181 Sulfurtransferasese or Rhodanese AT5G66170 46.364 1.41e-31 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01331 - - aprc:113868825 263.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g01331 9 11285579 11287937 Trre15g02649 15 22314748 22316381 PCT