Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01330 ATGATAGCAACGTCATTTGATGTCTCCGCCGTTTGCTTCCATTCAAGTCCTCTAACTCTACGGAAGAAAACGAACATAACAAGTTTTTCGTTTATAAGATCTTCCAACATTAACATGGGACACACAAGTGTTATTGTTCAACCAAAATTTTCAAATTTCCGCACGATGTGTAGTTTAAAGGGGAATTTGGAAGACACTATTGTTGGAGTTCCAACTTCAGTGCCAGTGCGTGTAGCACACGAGCTTCTTCTAGCTGGTCATAAGTATTTGGATGTAAGAACCCCTGAAGAGTTTAATGCTGGACATGCTCCTGGTGCAATTAACATACCTTATATGTATAGAGTTGGATCAGGGATGACAAAGAACAGCAATTTTGTTAAAGAGGTCTCCTCACAATTTAGAAAAGAAGATGAAATTATTGTTGGATGTCAGCTTGGTAAAAGGTCTATGATGGCTGCTACCGACTTGTTAGCTTCGGGATTCACTGGATTAACAGACATAGCTGGTGGTTATGCTGCATGGACCCAAAATGGACTTCCTACAGAACAATGA 552 0.4004 MIATSFDVSAVCFHSSPLTLRKKTNITSFSFIRSSNINMGHTSVIVQPKFSNFRTMCSLKGNLEDTIVGVPTSVPVRVAHELLLAGHKYLDVRTPEEFNAGHAPGAINIPYMYRVGSGMTKNSNFVKEVSSQFRKEDEIIVGCQLGKRSMMAATDLLASGFTGLTDIAGGYAAWTQNGLPTEQ 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01330 183 Gene3D - 60 182 IPR036873 -
Trre9g01330 183 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 4 182 - -
Trre9g01330 183 ProSiteProfiles Rhodanese domain profile. 83 183 IPR001763 -
Trre9g01330 183 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 69 182 IPR036873 -
Trre9g01330 183 CDD RHOD 90 174 - -
Trre9g01330 183 SMART rhod_4 73 180 IPR001763 -
Trre9g01330 183 Pfam Rhodanese-like domain 89 176 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01330 Trre-Chr9 11285579 11287937 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01330 73 180 Sulfurtransferasese or Rhodanese AT5G66170 46.364 1.37e-31 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01330 - - aprc:113868825 266.159