Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01314 ATGGCTAGCAACAACAAGGAGAAGGAGAAAGACATTGAGTTTATGTTTATCGATGATGATGTTGAGGAAGGTGAACAACCTGAGAAGATAGAGAGTGAGAGTGGCAGTGAAAGTGGTGATGGCAGTGATGATGGTGAGGGAAATCATAGGGATCAACCTCAATCTTTCACTTCTCAGATATGGCCTCAAAGTTACAAGGAGACTACAGATTCTTACACAATTGCTACAGCTCCAACTTTTGGGTCAATGCTAAAAGGACCAAGTTTTATTTATTCAAGTTTTACCAATCGTTCAAAGAGTAACTTAGAAATAGATGGAAAGACTCCTTTTCTATCATCAGGTCTTGATCAAGGCACTGTTCAAACAACAACATGGTGGGAGAAAGGTTCAATGCAAAATCTTGTTGGAGAAATGCCTATTGGTTATGGTTGCAGCCTCACTCAAACAGTTTTCAACGCGATTAATGTGATGGCTGGAGTGGGACTTTTGTCTACACCGTATACAGTGAAAGAAGCCGGTTGGGCGGGCATGGTGGTGATGCTTATTTTTGCAGGTGTTTGTTGTTATACAGCCACCCTTATGAAACGCTGCTTTGAAAGCCGAGAAGGACTCACTAGCTATCCAGATATAGGAGAAGCTGCATTCGGTAGATATGGCCGTATTTTTGTATCTATCATTTTGTACACTGAATTATATTCATATTGTGTGGAATTCATCACCTTGGAAGGAGATAACCTGACTGGTCTGTTTCCGGGAACATCCTTAGATTTAGGTGGTCTCCATTTGGATTCCACGCACTTGTTTGGAATTCTGACTGCACTTATTATTCTCCCTACTGTTTGGTTGAAGGATCTCCGAATAATCTCGTATCTATCAGTTGGAGGGATTGTAGCGACAATATTGATTATCATTTGTGTGTTCTCTGTCGGGACAACTGTTGGATTCCATCATACTGGTCAAGTGGTGAATTGGAGTGGCATTCCGTTTTCTATCGGTGTCTACGGGTTTTGCTTTGCAGGACATTCGGTCTTTCCAAATATATACCAGTCTATGGCCGACAAAAAACAATATACAAAAGCATTGATAATATGTTTTGTTTTGTGTGTTTTGATATATGGAAGCGTCGCAGTCATGGGATTTCTCATGTTTGGTGATGGAACTTTGTCTCAGATAACATTGAATATGCCGACAGGTGCATTTGCTTCCAAAGTCGCGTTGTGGACAACAGTTGATTTTTCCTTAACAATTAACACATATGCTTTGTTGATGAATCCACTCGCAAGGAGTCTAGAGGAATTGCTTCCGGAAAGAGTTTCAAGTACTTATTGGTGTTTTATTCTTCTTAGAACAGCACTTGTCGCATCTACAGTTTGTGCTGCTTTTCTGATTCCGTTTTTCGGACTTGTGATGGCTTTGATCGGTTCTCTCTTCAGTATGCTGGTGTCAGTGATAATGCCTAGTTTATGCTTTATAAAAATTGTGGGGAAAAAAGCTACAAAGACACAGGTTGTCACGAGCCTTATAGTTGCTGCAGCAGGAATCATTTGTGGACTCATTGGAACATATTCCTCTTTGATGAATATTGCTGATAGTTACTAA 1599 0.404 MASNNKEKEKDIEFMFIDDDVEEGEQPEKIESESGSESGDGSDDGEGNHRDQPQSFTSQIWPQSYKETTDSYTIATAPTFGSMLKGPSFIYSSFTNRSKSNLEIDGKTPFLSSGLDQGTVQTTTWWEKGSMQNLVGEMPIGYGCSLTQTVFNAINVMAGVGLLSTPYTVKEAGWAGMVVMLIFAGVCCYTATLMKRCFESREGLTSYPDIGEAAFGRYGRIFVSIILYTELYSYCVEFITLEGDNLTGLFPGTSLDLGGLHLDSTHLFGILTALIILPTVWLKDLRIISYLSVGGIVATILIIICVFSVGTTVGFHHTGQVVNWSGIPFSIGVYGFCFAGHSVFPNIYQSMADKKQYTKALIICFVLCVLIYGSVAVMGFLMFGDGTLSQITLNMPTGAFASKVALWTTVDFSLTINTYALLMNPLARSLEELLPERVSSTYWCFILLRTALVASTVCAAFLIPFFGLVMALIGSLFSMLVSVIMPSLCFIKIVGKKATKTQVVTSLIVAAAGIICGLIGTYSSLMNIADSY 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01314 532 PANTHER OS05G0424000 PROTEIN-RELATED 150 512 - -
Trre9g01314 532 MobiDBLite consensus disorder prediction 1 15 - -
Trre9g01314 532 Pfam Transmembrane amino acid transporter protein 145 523 IPR013057 -
Trre9g01314 532 MobiDBLite consensus disorder prediction 28 50 - -
Trre9g01314 532 FunFam Amino acid transporter AVT1A 142 531 - -
Trre9g01314 532 Gene3D Amino acid/polyamine transporter I 143 530 - -
Trre9g01314 532 MobiDBLite consensus disorder prediction 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01314 Trre-Chr9 11117746 11121474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01314 3 467 Amino Acid or Auxin Permease AAAP Family AT2G41190 63.158 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01314 K15015 - gmx:100790344 809.675