Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01283 ATGGAAGAAGTTTGGAAAGACATAAACTTATCTTCATTGAATGACCAAAACACAAGACCTATCTTGAATACTCGTTCTACTTTTGGTGGTGTTATTCTTCAAGATTTTCTTACTAGACCCCTTAACTTAGACCCACCACCAAAAAGCTTAGATTATTCTTCTAATAATTCATCTTCTTCTGTTGCTTCTGATCAAAACAACAACAATACTAATAATAATAATGCTTCTTTTTATTGTTCTGCCCCACCACCACCACTTGTCACTGCTCTTAGTTTGAACTCTCACCATCCTGATTTTCTTCATCATCATCAGCAACAAAATGTTTCTACTTGTTTTGTTAATCCTTCATCTTATGAACAAAATGTGGGTGTTGGTTCAAATTCTTTCACTTGTTTTGGGAAGAGGTTTGGTGAACCTGATATTAGTCCTGGTGAAAGAAGAAACAAGAGAATGATCAAGAATAGAGAATCTGCTGCACGTTCAAGAGCTAGAAAACAGGAAAAGATTGCTTACACAACTGAACTAGAACAAAAAGTTGAACTATTACAAGAAGAAAATGCAAGACTTAAAAGACAGCAAAAAGAGTTATTTGAAGCAGAAATTGGCGTTCAACAAAAGAAGAAGAATAGCTTATATCGAACATCAACATTTTAA 654 0.341 MEEVWKDINLSSLNDQNTRPILNTRSTFGGVILQDFLTRPLNLDPPPKSLDYSSNNSSSSVASDQNNNNTNNNNASFYCSAPPPPLVTALSLNSHHPDFLHHHQQQNVSTCFVNPSSYEQNVGVGSNSFTCFGKRFGEPDISPGERRNKRMIKNRESAARSRARKQEKIAYTTELEQKVELLQEENARLKRQQKELFEAEIGVQQKKKNSLYRTSTF 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01283 217 Coils Coil 172 202 - -
Trre9g01283 217 MobiDBLite consensus disorder prediction 48 77 - -
Trre9g01283 217 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 149 164 IPR004827 GO:0003700|GO:0006355
Trre9g01283 217 MobiDBLite consensus disorder prediction 44 77 - -
Trre9g01283 217 Gene3D - 144 199 - -
Trre9g01283 217 Pfam bZIP transcription factor 146 198 IPR004827 GO:0003700|GO:0006355
Trre9g01283 217 CDD bZIP_plant_BZIP46 146 196 - -
Trre9g01283 217 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 144 196 IPR004827 GO:0003700|GO:0006355
Trre9g01283 217 SUPERFAMILY Leucine zipper domain 146 198 IPR046347 GO:0003700|GO:0006355
Trre9g01283 217 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 1 214 IPR043452 GO:0003700|GO:0045893
Trre9g01283 217 SMART brlzneu 142 210 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01283 Trre-Chr9 10862985 10864204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01283 1 170 bZIP Transcription Factor Family AT2G17770 40.113 9.93e-21 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trre9g01283 bZIP_1 1.2e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01283 K14432 - gmx:102660922 142.51