Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01272 ATGGAGAAACATGAAACACAAAATTGGTTTGAAAGAGCAAAACCATTCATAGCAGTTGTGCTTTTGCAATTTGGATATGCAATTATGGATGTTTTATCAAAGGCTGCAATGAATGAGGGAATGAGCAATTATGTATTTATTGTGTATCGCCATGTTGTAGCATTCATTTTCATAACCCCTTTTGCACTCTATTTTGACAATTATAAATATAAGAAAGTAAGGACTAAAATGACAATGTCAATCTTCATGAAGATAGTGTTGCTCAGCTTTCTAGAACCTGTTATTGGTCAAAATTTGTATTTTTTAGGGATGAAGTACACAACAGCAACCTTTGCAGCTGCCATGACCAATATCCTTCCTGCCAGTGCCTTTATCTTGGCCTGCATTTTTAGGCTTGAGAAGATAAAGGTAAAAAGTATAAGGAGCCAAGCAAAAGTGGTGGGAACCATAGCATCTGTTTCAGGTGCAATGTTGATGACTCTAATTAAAGGTCCTGTACTTTTAGGGACATTTGGAGGCAATAGTCATAACCAATATAGTGATGAGACCAATAGTGAACATATATTAGTTGGCTCTATTATGATTGCATTAGGATGCTTTAGTTGTGCTTGTTTTGTGATCCTTCAAGCTATTACCCTTAAAACCTATCCTGCACCACTCTCTCTTGCCTCATGGATATGTTTTTTGGGCACACTTGAAACTGCAGTAGTGGCTATGATTATGGAATGGTGTAATCCTTCAGTTTGGTATATAAAATGGGATATGAGATTGTTGTCAATTGTTTACACTGGTATAGTCTGCTCAGGAGTGTTATATTTTGTGCAAGGAGTAGTGGTGAAATCTAGAGGCCCAATATTTGTAACAGCTGTTAGTCCTTTATGCACAGTAATTGTTGCTATCATGGGATACTTCATTTTGGCTGAAGAATTGTTCCTTGGAAGGGTTATTGGTGCAATTGTTACTTGTTTGGGCTTATATCTTGTTGCTTGGGGCAAAAGCAAAGATTACACTCCATCAGAACCAGTTATTCAAGAATTTATATTTTCAACTGATGAAGGCAATGTTAAGAATGAACATTTTGCTCAAGAGATCGTCACTATTCAGTAA 1107 0.3659 MEKHETQNWFERAKPFIAVVLLQFGYAIMDVLSKAAMNEGMSNYVFIVYRHVVAFIFITPFALYFDNYKYKKVRTKMTMSIFMKIVLLSFLEPVIGQNLYFLGMKYTTATFAAAMTNILPASAFILACIFRLEKIKVKSIRSQAKVVGTIASVSGAMLMTLIKGPVLLGTFGGNSHNQYSDETNSEHILVGSIMIALGCFSCACFVILQAITLKTYPAPLSLASWICFLGTLETAVVAMIMEWCNPSVWYIKWDMRLLSIVYTGIVCSGVLYFVQGVVVKSRGPIFVTAVSPLCTVIVAIMGYFILAEELFLGRVIGAIVTCLGLYLVAWGKSKDYTPSEPVIQEFIFSTDEGNVKNEHFAQEIVTIQ 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01272 368 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020
Trre9g01272 368 Pfam EamA-like transporter family 17 160 IPR000620 GO:0016020
Trre9g01272 368 PANTHER WAT1-RELATED PROTEIN 14 336 IPR030184 GO:0016020|GO:0022857
Trre9g01272 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 231 333 - -
Trre9g01272 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01272 Trre-Chr9 10761253 10764187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01272 1 336 Nodulin-like Gene Family AT2G37460 59.763 2.70e-145 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01272 - - gmx:100811147 490.345