Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01271 ATGAGAAGAAAAGCTATAGAGAAATTACCAGAGAAAAGCGTGATAGGGCCGGTTCAAAACAATTCCAACTATTCCTCCCCTTCGTCTTGTGCAGAGAAGATCGCCGGTCGCGAAGTAGAGAAGACTTCAAAATTTGGAGTCAAGAAGCTTTTACCAGCTTCTCTTGATCCAAATTTGCAACTTCAAGATCTCCTAACAGGTGTAAGCTTTGCCTCTGGTGGCGCTGGATATGATCCTCTAACATCTCAATTAGCATCTGTGATATCATTGTCAGATCAATTGGACATGTTCAAGAAGTACAAAAATAAGATAAATGAAGCAATTGGAGAAGAGAGAATGAAAATGATAATATCAAAGAGTGTATATATTATTTGCATAGGAAGTGATGACATTGCCAATACTTATACTCAAACACCATATAGGAGATTCAACTATGATATTCCATCATACACAGACTTATTGGCTTCACATTCCTCAAACTTCTTGCAGTTATTGTCTCTCCTTATTGATATCAGAATTGATAGATCAATCAATTAG 537 0.3687 MRRKAIEKLPEKSVIGPVQNNSNYSSPSSCAEKIAGREVEKTSKFGVKKLLPASLDPNLQLQDLLTGVSFASGGAGYDPLTSQLASVISLSDQLDMFKKYKNKINEAIGEERMKMIISKSVYIICIGSDDIANTYTQTPYRRFNYDIPSYTDLLASHSSNFLQLLSLLIDIRIDRSIN 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01271 178 PANTHER GDSL ESTERASE/LIPASE EXL3 43 166 - -
Trre9g01271 178 Gene3D SGNH hydrolase 19 170 IPR036514 -
Trre9g01271 178 Pfam GDSL-like Lipase/Acylhydrolase 44 156 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01271 Trre-Chr9 10759632 10761143 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01271 46 165 Pollen Coat Proteome AT1G75910 40.496 7.22e-20 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01271 - - ahf:112723705 193.356