Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01244 ATGGGTAAGGCACATAAAGATCGCTCTGATTTTGAAGGTCCATGGACAAGAGACCCTCTTAAATTTGATAACTCTTATTTTGTGGAACTATTGAAATCGGAATCAAAAGACTTATTAAAGCTTCCCACGGATAAAGCTCTGGTTGAAGATCCTGAGTTCCGCAAGTATGTTGAACTTTATGCTAAGGATGAGGATGCATTTTTCAGAGATTATGCAATATCACACAAGAAACTTTCTGAACTAGGCTTCAATCCAAATTGCAATTATCGTTCCAAATTGGCCAAGGGAGTTCTAGGATTTGCTATTGCCTCAACCGTTGTGATGCTTGGTTACTTACTTGAACTCAACAAAATAATCGATTGA 363 0.3774 MGKAHKDRSDFEGPWTRDPLKFDNSYFVELLKSESKDLLKLPTDKALVEDPEFRKYVELYAKDEDAFFRDYAISHKKLSELGFNPNCNYRSKLAKGVLGFAIASTVVMLGYLLELNKIID 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01244 120 SUPERFAMILY Heme-dependent peroxidases 2 86 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre9g01244 120 Pfam Peroxidase 18 63 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g01244 120 PRINTS Plant ascorbate peroxidase signature 1 7 IPR002207 GO:0004601|GO:0006979|GO:0020037
Trre9g01244 120 PRINTS Plant ascorbate peroxidase signature 59 83 IPR002207 GO:0004601|GO:0006979|GO:0020037
Trre9g01244 120 Gene3D Peroxidase, domain 2 1 75 - -
Trre9g01244 120 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 2 85 IPR044831 GO:0004601|GO:0034599
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01244 Trre-Chr9 10550686 10551482 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01244 19 83 Peroxidase AT3G28200 44.615 1.08e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01244 K00434 - gmx:100806101 184.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g01244 9 10550686 10551482 Trre9g01244 9 10550686 10551482 ECH