Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01235 ATGGCTGTTTCAACCAAATTGTTACCTCGTTGTTTGGCGTTTCTTCTTATCTTGTCTATTTCAAGAGCAAAGATTGTAACTATTGATGTACGAGAAGCCAAAAATCTCATCCAAAACGGTTACATTTATCTTGATGTTAGGACGGTGGAAGAGTTTGTGAAAGGGCATGATATTCCATACATGTTGGATACACCCAAGGGTAAGGTGAAGAACCCATACTTTTTAAAGGAGGTTTCATCTGCTTATAAGAAAAAAGCTCATCTCGTAGTGGGTTGTCAAATTGGGAGGAGATCTCAGCACGCAACTTCAGATCTTCTAGCTAATGGTTTTAAGAATGTGAAAGCCATGGGAGGAGGTTATGTGGAATGGGTAAGAAGCAAGTTTCCAGTGATTACAATGGCAGATCTTCTTGGATAA 417 0.3933 MAVSTKLLPRCLAFLLILSISRAKIVTIDVREAKNLIQNGYIYLDVRTVEEFVKGHDIPYMLDTPKGKVKNPYFLKEVSSAYKKKAHLVVGCQIGRRSQHATSDLLANGFKNVKAMGGGYVEWVRSKFPVITMADLLG 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01235 138 SMART rhod_4 28 129 IPR001763 -
Trre9g01235 138 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 23 131 IPR036873 -
Trre9g01235 138 ProSiteProfiles Rhodanese domain profile. 37 132 IPR001763 -
Trre9g01235 138 Gene3D - 18 130 IPR036873 -
Trre9g01235 138 PANTHER THIOSULFATE SULFURTRANSFERASE 18 21 131 IPR044684 GO:0003824
Trre9g01235 138 Pfam Rhodanese-like domain 32 125 IPR001763 -
Trre9g01235 138 CDD RHOD 32 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01235 Trre-Chr9 10470147 10473269 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01235 19 132 Sulfurtransferasese or Rhodanese AT5G66170 47.934 7.65e-38 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01235 - K15692 gmx:100803436 175.252