Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01221 ATGGGTGACATAGTGAAACAAATATTAGCAAAACCGATTCAATTAGCAGACCAAGTAACAAAATCAGCAGATGAAGCAAGTTCATTCAAACAAGAATGTAACGAACTCAAATCCAAAACTGAAAAACTCGCCGGACTTCTCCGACAAGCAGCAAGAGCAAGTTCCGATCTATACGAACGTCCAACAAAACGAATCATCGAAGAAACCGAACAAGTTCTCGACAAAGCACTTTCCTTAGTCCTTAAATGTCGTGCAAATGGTATCATGAAACGTGTCTTCACCATTATCCCCGCCGCCGCTTTCCGTAAAACATTGTCACATTTAGAAAACTCAATCGGAGATGTTTCTTGGCTCCTCCGTGTCTCTGCTCCGGCAGATGATCGCGGCGGAGAGTATCTCGGACTTCCACCTATTGCTGCTAATGAACCAATTCTCTGTTTCATTTGGGAACAGATCGCTATACTTTACACCGGTTCGATGGAAGATCGTTCCGACGCGGCGGCGTCGCTTGTTTCGTTAGCACGCGGCAGTGACCGTTATGGTAAACTTATAATCGAAGAAGGCGGTGTTGGACCGCTTTTGAAGCTGATTAAAGAAGGAAAAATTGATGGACAAGAAAATGCTGCTAGAGCTATTGGTTTACTTGGTCGTGATTCTGAATGTGTTGAACATATGATTCATGTTGGTGTTTGTTCTGTTTTTGGTAAGATTCTTAAAGAAGGTCCTATGAAAGTTCAAAGTGTTGTTGCTTGGGCTGTTTCTGAACTTGCTGCTAATTATCCTAAATGTCAAGATCTTTTTGCTCAACATAATATAATAAGATTACTTGTTGGTCATCTTGCTTTTGAAACTGTTGAAGAACATAGTAAATATGCTATTGTTAGTATGAAACCGACTTCGATTCACGCTGTTGTTATGGCGAGTAATAATACTAATTCTAATCTTAATCCTAACAAGGGAAATGAAAATGAAGATGTTGGTGTTGGTGCTGGTGGTGGTAACAATAAGCAGGGTCGGGTATCGAATCATCCGTTGGGGGAAAGACCGAGGAATTTGCATAGAGTGATTACAAGTACTATGGCAATTCATGCTGCTACCAAGCAGAGTGGTGAAGAAAATGAAGCAAATCAAAATCAGAATTTTTTGGCTAATTCCTATACGCCGCCACCGCCGCCTAATGGCAATGGATTTGGTAATGGTGGTGGTAAGCAAGGAAATCATGGTAATCATCAGAGAAATTATTCGCATTCGGGAATTAATATGAAGGGAAGGGAAAGTGAAGATCCTGAGATTAAGGCAAGTATGAAGGAAATGGCAGCGAGAGCGCTATGGCATTTGGCTAAGGGTAATGTGGCGATTTGTCGTAGCATTACGGAATCAAGGGCTTTGTTGTGTTTTGCGGTTTTACTTGAGAAAGGGCCGGAGGCTGTGCAGTACAATTCTGCTATGGCATTGATGGAGATTACTGCGGTGGCTGAGAAAGATGCTGAATTGAGAAAATCTGCATTTAAGCCTAATTCTACTGCCTGCAAAGCAGTTGTTGATCAAGTGCTTAAGATAATTGAGAAAGCGGATTCAGATCTTCTCATTCCTTGTGTCAGGGTGATTGGGAATTTGGCAAGGACATTCAAGGCTACCGAGACAAGGATGATTGGTCCGTTGGTGAAACTTCTTGACGAAAGAGAGGCAGAGGTTTCCAGAGAGGCGTCAATCGCACTCAAGAAATTTGCCGGCGGTGAAAACTACCTTCATGTCGATCACTCCAAAGCAATTATAGGTGCAGGTGGTGCAAAACACTTGATTCAGCTTGTGTATTTCGGAGAACAAATGGTGCAGATTCCAGCATTGGTGCTACTCTCTTACATTGCATTGCATGTGCCGGATAGCGAAGAACTTGCTCTAGCTGAAGTGCTTGGAGTGCTTGAATGGGCATCCAAGCAATCTTTCATGCAACATGATGAAACCCTTGAGACATTGTTGCAAGAAGCCAAGAGTAGGTTGGAGCTTTATCAGTCTAGAGGTTCAAGAGGATTCCATCACAAATTGCATCAATAG 2055 0.4248 MGDIVKQILAKPIQLADQVTKSADEASSFKQECNELKSKTEKLAGLLRQAARASSDLYERPTKRIIEETEQVLDKALSLVLKCRANGIMKRVFTIIPAAAFRKTLSHLENSIGDVSWLLRVSAPADDRGGEYLGLPPIAANEPILCFIWEQIAILYTGSMEDRSDAAASLVSLARGSDRYGKLIIEEGGVGPLLKLIKEGKIDGQENAARAIGLLGRDSECVEHMIHVGVCSVFGKILKEGPMKVQSVVAWAVSELAANYPKCQDLFAQHNIIRLLVGHLAFETVEEHSKYAIVSMKPTSIHAVVMASNNTNSNLNPNKGNENEDVGVGAGGGNNKQGRVSNHPLGERPRNLHRVITSTMAIHAATKQSGEENEANQNQNFLANSYTPPPPPNGNGFGNGGGKQGNHGNHQRNYSHSGINMKGRESEDPEIKASMKEMAARALWHLAKGNVAICRSITESRALLCFAVLLEKGPEAVQYNSAMALMEITAVAEKDAELRKSAFKPNSTACKAVVDQVLKIIEKADSDLLIPCVRVIGNLARTFKATETRMIGPLVKLLDEREAEVSREASIALKKFAGGENYLHVDHSKAIIGAGGAKHLIQLVYFGEQMVQIPALVLLSYIALHVPDSEELALAEVLGVLEWASKQSFMQHDETLETLLQEAKSRLELYQSRGSRGFHHKLHQ 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01221 684 Gene3D - 3 121 IPR036537 GO:0007166
Trre9g01221 684 Gene3D - 425 502 IPR011989 -
Trre9g01221 684 Gene3D - 150 318 IPR011989 -
Trre9g01221 684 MobiDBLite consensus disorder prediction 399 420 - -
Trre9g01221 684 SMART arm_5 177 217 IPR000225 GO:0005515
Trre9g01221 684 SMART arm_5 584 624 IPR000225 GO:0005515
Trre9g01221 684 SMART arm_5 506 541 IPR000225 GO:0005515
Trre9g01221 684 SMART arm_5 218 258 IPR000225 GO:0005515
Trre9g01221 684 SMART arm_5 450 490 IPR000225 GO:0005515
Trre9g01221 684 Gene3D - 503 661 IPR011989 -
Trre9g01221 684 Coils Coil 653 673 - -
Trre9g01221 684 MobiDBLite consensus disorder prediction 381 430 - -
Trre9g01221 684 SUPERFAMILY ARM repeat 153 641 IPR016024 -
Trre9g01221 684 FunFam Armadillo repeat only 4 2 121 - -
Trre9g01221 684 MobiDBLite consensus disorder prediction 312 347 - -
Trre9g01221 684 FunFam Armadillo repeat only 2 150 319 - -
Trre9g01221 684 Pfam Armadillo/beta-catenin-like repeat 183 214 IPR000225 GO:0005515
Trre9g01221 684 PANTHER ARMADILLO REPEAT ONLY 4 1 675 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01221 Trre-Chr9 10064365 10066419 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01221 - - mtr:11433980 1166.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g01221 9 10064365 10066419 Trre9g01221 9 10064365 10066419 ECH
Trre15g02670 15 22505843 22507867 Trre9g01221 9 10064365 10066419 PCT