Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01212 ATGGTTCTCCCTATAGTTGTTGAAGATGTAAAGAGAGAAGTCAAGATATTGAAAGAACTTACAGACCATGAAAATGTGGTTCAATTCTATAATGCTTTTGAGGATGACTCATATGTGTACATAGTTATGGAGTTATGCGAAGGCGGAGAACTTCTAGACCGGATATTGGGCAAGAAGGACAACCGTTATACTGAAAAAGATGCTGCAGTGGTTGTAAGGCGAATGCTGAAGGTTGTAGCTCAGTGTCATTTACATGGCTTGGTACATCGCGACATGAAGCCAGAGGTGCGTTCAAAACCATCTAGGCCGCACTATTTTTCAAATAAGAACCGTATGCCTATTAAAAGGAGACTGACATTCGGCCCTCAAATCATTGATCCCTATGAAAATGACATGCACAATCCTGAACTCAGTAGCTTAGCAATTATAGAATTTCGTCAAATTCCTATAATTAGAATCAATGATCCTATGGATGCTGGGCTTTATATTGGAGACACATGCTTAGCTTATGGAATTAGAGGATTAGTATTTCTTCTTGGCCGTGAATATCATCAAGTAGGGAACCCTGTTGTACGAAAACTTTCAAATCAATCCCAACGTCCAATAATTATTGAAGATCCATCTGCTAATCAGTTCTTGGGGTATGATGCTTTAAGGAATAAGTACAAGGTTATAAGGTTTATGAATTTAGAAGATGAAGAAGATGAAGGAACCGTTATCCATTGTTTCACAATTGGGTTGGAAGGAATAAGTACACATTTTGTTCCAACAATATCCCCTTTTTTATGA 789 0.3802 MVLPIVVEDVKREVKILKELTDHENVVQFYNAFEDDSYVYIVMELCEGGELLDRILGKKDNRYTEKDAAVVVRRMLKVVAQCHLHGLVHRDMKPEVRSKPSRPHYFSNKNRMPIKRRLTFGPQIIDPYENDMHNPELSSLAIIEFRQIPIIRINDPMDAGLYIGDTCLAYGIRGLVFLLGREYHQVGNPVVRKLSNQSQRPIIIEDPSANQFLGYDALRNKYKVIRFMNLEDEEDEGTVIHCFTIGLEGISTHFVPTISPFL 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01212 262 ProSiteProfiles Protein kinase domain profile. 1 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g01212 262 SUPERFAMILY Protein kinase-like (PK-like) 6 95 IPR011009 -
Trre9g01212 262 Gene3D Phosphorylase Kinase; domain 1 28 45 - -
Trre9g01212 262 PANTHER SERINE/THREONINE-PROTEIN KINASE 7 95 - -
Trre9g01212 262 Pfam Protein kinase domain 9 95 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g01212 262 Gene3D Transferase(Phosphotransferase) domain 1 9 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01212 Trre-Chr9 9987653 9988863 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01212 1 95 EF-hand Containing Proteins AT5G66210 84.211 2.15e-50 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Trre9g01212 Pkinase 1.5e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01212 K13412 - csav:115714943 180.259