Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre9g01212 | ATGGTTCTCCCTATAGTTGTTGAAGATGTAAAGAGAGAAGTCAAGATATTGAAAGAACTTACAGACCATGAAAATGTGGTTCAATTCTATAATGCTTTTGAGGATGACTCATATGTGTACATAGTTATGGAGTTATGCGAAGGCGGAGAACTTCTAGACCGGATATTGGGCAAGAAGGACAACCGTTATACTGAAAAAGATGCTGCAGTGGTTGTAAGGCGAATGCTGAAGGTTGTAGCTCAGTGTCATTTACATGGCTTGGTACATCGCGACATGAAGCCAGAGGTGCGTTCAAAACCATCTAGGCCGCACTATTTTTCAAATAAGAACCGTATGCCTATTAAAAGGAGACTGACATTCGGCCCTCAAATCATTGATCCCTATGAAAATGACATGCACAATCCTGAACTCAGTAGCTTAGCAATTATAGAATTTCGTCAAATTCCTATAATTAGAATCAATGATCCTATGGATGCTGGGCTTTATATTGGAGACACATGCTTAGCTTATGGAATTAGAGGATTAGTATTTCTTCTTGGCCGTGAATATCATCAAGTAGGGAACCCTGTTGTACGAAAACTTTCAAATCAATCCCAACGTCCAATAATTATTGAAGATCCATCTGCTAATCAGTTCTTGGGGTATGATGCTTTAAGGAATAAGTACAAGGTTATAAGGTTTATGAATTTAGAAGATGAAGAAGATGAAGGAACCGTTATCCATTGTTTCACAATTGGGTTGGAAGGAATAAGTACACATTTTGTTCCAACAATATCCCCTTTTTTATGA | 789 | 0.3802 | MVLPIVVEDVKREVKILKELTDHENVVQFYNAFEDDSYVYIVMELCEGGELLDRILGKKDNRYTEKDAAVVVRRMLKVVAQCHLHGLVHRDMKPEVRSKPSRPHYFSNKNRMPIKRRLTFGPQIIDPYENDMHNPELSSLAIIEFRQIPIIRINDPMDAGLYIGDTCLAYGIRGLVFLLGREYHQVGNPVVRKLSNQSQRPIIIEDPSANQFLGYDALRNKYKVIRFMNLEDEEDEGTVIHCFTIGLEGISTHFVPTISPFL | 262 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre9g01212 | 262 | ProSiteProfiles | Protein kinase domain profile. | 1 | 262 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre9g01212 | 262 | SUPERFAMILY | Protein kinase-like (PK-like) | 6 | 95 | IPR011009 | - | |
Trre9g01212 | 262 | Gene3D | Phosphorylase Kinase; domain 1 | 28 | 45 | - | - | |
Trre9g01212 | 262 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 7 | 95 | - | - | |
Trre9g01212 | 262 | Pfam | Protein kinase domain | 9 | 95 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre9g01212 | 262 | Gene3D | Transferase(Phosphotransferase) domain 1 | 9 | 95 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre9g01212 | Trre-Chr9 | 9987653 | 9988863 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre9g01212 | 1 | 95 | EF-hand Containing Proteins | AT5G66210 | 84.211 | 2.15e-50 | 169 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CDPK | Trre9g01212 | Pkinase | 1.5e-20 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre9g01212 | K13412 | - | csav:115714943 | 180.259 |