Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01170 ATGTCTGTGATTAACAAAGCTACATTTGAGATTGACAAATACATACCATGTGGTTCGAAGAATATCGTCATTTTGTATGATCATTTTGTCGATGAACAGGGTAAGATGAATCTTGTTCTCGAACGGGGTCTGTGCCCGCTGGTTGAGTTAATAAATTGGTATAATTCGGAGACGCTTCCCCCTGATGCAACTGAAAGACAGAAACGTTTTTTGACTAACGTGCGTGATCAAAGAATCCTAGGCGAGAAAGGTCAGAGCCCAACTCCTTGGTTACTTAGCTTATTGAGAGATATTTTATCTGGGTTGAAAGAGCTAAAAGATAAAAATATCAAACATGACCATTTGACTGCTGACAATGTTTTGATATTTGACGACGGTAAAGCCAAACTTGTTATGAGTAAACATGAGAGGCAAACTCTTGATTTCAATGATAGAGATACATTATCGATCGCTGGTATAATTTATTATTGTGCTACTTTGGGAGAAAATGTCCAAATTCGAAATAGTGAGGTCACAACTCGTAGAATCATACCTGATCTTGATGACTTGATCAACACCTTGTATGCTAAACATAGAAACCTGTAA 585 0.3744 MSVINKATFEIDKYIPCGSKNIVILYDHFVDEQGKMNLVLERGLCPLVELINWYNSETLPPDATERQKRFLTNVRDQRILGEKGQSPTPWLLSLLRDILSGLKELKDKNIKHDHLTADNVLIFDDGKAKLVMSKHERQTLDFNDRDTLSIAGIIYYCATLGENVQIRNSEVTTRRIIPDLDDLINTLYAKHRNL 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01170 194 SUPERFAMILY Protein kinase-like (PK-like) 6 158 IPR011009 -
Trre9g01170 194 Gene3D Transferase(Phosphotransferase) domain 1 5 194 - -
Trre9g01170 194 ProSiteProfiles Protein kinase domain profile. 1 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01170 Trre-Chr9 9447911 9448495 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Trre9g01170 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01170 - K00908 pif:PITG_17359 43.1282