Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01165 ATGCAAACTTTTCTCTTCATATTGTTACTCTGCGCACCATTCTTATCCTACGCCGATAACAGTAACACAACCGTAACCGTAACAGAGATCCAAGCTTTAACGTCGTTTAAGCTAAACCTCCATGATCCTCTCGGAGCACTTGACGGTTGGGATCCATCTTCACCGGAAGCACCGTGTGACTGGCGCGGCGTTGCTTGTAACAATGACCGAGTCACTGAGCTTCGTTTGCCTCGTCTTCAACTCGGTGGTAGACTCAGTGAACGTCTTTCAGAGTTACGCATGTTAAGGAAACTAAGCCTTCGTTCGAATTTCTTCAACGGAACGATTCCGAGAGCGTTGATGAAATGTAAGCTACTTCGGTTTTTGTTCTTGCAGGATAATGTGTTTTCCGGTGAGATTCCGCCGGAGATCGGGAACCTTACCGGTCTTAAGATTCTCAATGTTGCTCAGAATAATCTATCTGGAACTGTTCCGGGAGAGCTTCCGATTGGTTTGAAGTATCTTGACTTATCGTCGAATGCTTTCTCCGGTGAGATTCCGAGTACCGTTGGTAATCTCTCTCTTCTTCAGCTTATCAACCTTTCGTATAATCATTTCTCCGGTGAGATTCCGGCGATGTTCGGGGAGCTTCAGAATCTGCAATATCTATGGCTTGATCATAATTTTCTTGGAGGAACTTTACCTTCTGCACTTGCTAATTGTTCTTCGCTTGTGCATCTGAGTGCAGAGGGAAATTCACTCGGCGGCGTGATTCCGTCGGCGATTTCCGCGCTTCCAATGCTTCAGGTTTTGGATATTCAACACAATCACATAAGAGGCACGTTTCCCTTGTGGTTGACCAATGTAACCACGTTGTCAGTGCTTGATCTTTCGAGCAATGTACTTTCCGGCGAGATTCCGCGGCAGATAGGAAATCTCGCTGGGTTGACGGAGTTGAAGGTGGCTAATAATTCATTCACCGGCATCATTCCGGTGGAAATCAAGAAATGTGGGTCCCTCAGTGTTGTTGATTTTGAAGGAAACAATTTTGCCGGTGAAGTTCCGTCATTTTTCGGCGATATGAAGGGACTCAAGGTGCTATCTCTTGGTGGAAATTGCTTCTTTGGTTCTGTTCCTGTGAGTTTTGGTAACCTTTCTTCACTTGAAACCTTGAATTTGAGAAGCAATAGATTAAATGGTACTATGCCTGAAATGATAATGAGTTTGAGCAATTTAACAACACTAGACCTTAGTGGTAACAAGTTTACTGGTGTAATTTATGATACTATTGGGAATTTGAATCGATTAACGGTTCTAAATCTGAGTGGTAATGGCTTCTCTGGAAAAATCCCTTCTAGTTTGGGCAATCTTTTCAGGCTAACTACACTTGATTTGAGCAAACAAAATCTCTCTGGAGAGTTACCATTTGAGCTCTCTGGGCTGCCCAATCTGCATGTTATTGCTCTGCAGGAGAACAAGTTCTCTGGTGTAGTGCCTGAAGGTTTCAGCAGTTTGGTGAGTTTGCAGTATGTCAATCTTAGTTCTAATGCTTTTTCTGGGCATATTCCTGAGAACTATGGTTTTCTTCGATCGTTGGTTGTTCTTTCATTGTCGCATAATCACATTACAGGAATAATTCCTTCAGGAATTGGAAACAGTTCTGATATTGAGATTCTTGAGCTAGGATCAAATTCATTGGCAGGTCGTATTCCTACAGAGCTTTCTCGCCTAACACATTTGAAAGTTCTTGATTTGGGTGGTAACAAATTAACTGGGGATATGCCTGAAGATATCTCCAAATGTTTGTCATTGACCACATTGTTAGTATATCACAACAATCTTGCCGGTGCCATACCAGGGTCATTGTCGAATCTGTCAAAGCTAACAATGCTGGATCTCTCTGCTAACAACTTGAGTGGGCAAATTCCTAGTAATTTGTCTATGATCCCTAGTTTGGTCTATTTCAATGTCTCAGGGAACAATTTGGAAGGTGAGATACCGCAAAGTTTGGGATCACGGTTCAACAACCCTGCTGTATTTGCTGATAATCAGGGTTTATGTGGGAAGCCATTGGAATCAAAGTGTGAAGGTACAGACAATAGGGACAAAAAGAGGTTGATTGTGTTGATTATCATTATTGCAGTAGGAGCTTGCATATTAGTCCTATTTTGCTGTTTTTACATCATTGGTTTATGGAGATGGCGCAAGAAGCTCAAAGAAAGGGTTTCTGGGGAGAAGAAAAAGAGTCCTGCAAGAGCAAGTTCAGGAGCAAGTGGAGGCCGTGTCAGCAGTGAAAATGGTGGACCAAAACTCGTGATGTTCAACAGCAAAATCACACTTGCCGAAACAATTGAAGCAACGAGACAATTTGACGAAGAAAATGTACTAAGCAGAACAAGGTTTGGATTAGTATTCAAGGCCTGCTACAATGATGGAATGGTCCTTTCAATTCGCAGGCTCCCTGATGGATCATTGGATGAGAATATGTTCAGAAAAGAAGCTGAATCACTGGGCAAGATAAAGCACAGAAATTTAACCGTTCTCAGAGGCTACTATGCAGGACCACCTGATATGAGACTCTTGGCCTACGATTACATGCCCAACGGAAACCTTGCAACACTCCTCCAAGAAGCTTCTCACCAAGACGGCCATGTTCTAAATTGGCCAATGCGGCACCTCATTGCACTAGGAATCGCCCGAAAGAGACCAGTAATGTTCACACAAGATGAAGACATAGTGAAGTGGGTGAAAAAACAGCTTCAAAGAGGTCAAATTACAGAGCTATTAGAACCTGGTTTACTTGAATTGGATCCAGAATCATCAGAATGGGAAGAGTTTTTACTAGGTGTGAAAGTTGGTTTACTTTGCACAGCACCAGATCCTCTTGATCGACCAACCATGTCCGACATTGTTTTCATGCTCGAAGGTTGTCGTGTTGGTCCCGATATTCCATCCTCAGCTGATCCCACCTCTCATCATTCTCCAGCATAA 2970 0.4306 MQTFLFILLLCAPFLSYADNSNTTVTVTEIQALTSFKLNLHDPLGALDGWDPSSPEAPCDWRGVACNNDRVTELRLPRLQLGGRLSERLSELRMLRKLSLRSNFFNGTIPRALMKCKLLRFLFLQDNVFSGEIPPEIGNLTGLKILNVAQNNLSGTVPGELPIGLKYLDLSSNAFSGEIPSTVGNLSLLQLINLSYNHFSGEIPAMFGELQNLQYLWLDHNFLGGTLPSALANCSSLVHLSAEGNSLGGVIPSAISALPMLQVLDIQHNHIRGTFPLWLTNVTTLSVLDLSSNVLSGEIPRQIGNLAGLTELKVANNSFTGIIPVEIKKCGSLSVVDFEGNNFAGEVPSFFGDMKGLKVLSLGGNCFFGSVPVSFGNLSSLETLNLRSNRLNGTMPEMIMSLSNLTTLDLSGNKFTGVIYDTIGNLNRLTVLNLSGNGFSGKIPSSLGNLFRLTTLDLSKQNLSGELPFELSGLPNLHVIALQENKFSGVVPEGFSSLVSLQYVNLSSNAFSGHIPENYGFLRSLVVLSLSHNHITGIIPSGIGNSSDIEILELGSNSLAGRIPTELSRLTHLKVLDLGGNKLTGDMPEDISKCLSLTTLLVYHNNLAGAIPGSLSNLSKLTMLDLSANNLSGQIPSNLSMIPSLVYFNVSGNNLEGEIPQSLGSRFNNPAVFADNQGLCGKPLESKCEGTDNRDKKRLIVLIIIIAVGACILVLFCCFYIIGLWRWRKKLKERVSGEKKKSPARASSGASGGRVSSENGGPKLVMFNSKITLAETIEATRQFDEENVLSRTRFGLVFKACYNDGMVLSIRRLPDGSLDENMFRKEAESLGKIKHRNLTVLRGYYAGPPDMRLLAYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIALGIARKRPVMFTQDEDIVKWVKKQLQRGQITELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPTMSDIVFMLEGCRVGPDIPSSADPTSHHSPA 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01165 989 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 399 692 - -
Trre9g01165 989 SMART LRR_typ_2 426 450 IPR003591 -
Trre9g01165 989 SMART LRR_typ_2 378 401 IPR003591 -
Trre9g01165 989 SMART LRR_typ_2 92 116 IPR003591 -
Trre9g01165 989 SMART LRR_typ_2 618 642 IPR003591 -
Trre9g01165 989 SMART LRR_typ_2 498 520 IPR003591 -
Trre9g01165 989 SMART LRR_typ_2 282 306 IPR003591 -
Trre9g01165 989 SMART LRR_typ_2 570 594 IPR003591 -
Trre9g01165 989 SMART LRR_typ_2 258 277 IPR003591 -
Trre9g01165 989 SMART LRR_typ_2 210 234 IPR003591 -
Trre9g01165 989 SMART LRR_typ_2 354 377 IPR003591 -
Trre9g01165 989 SMART LRR_typ_2 402 425 IPR003591 -
Trre9g01165 989 SMART LRR_typ_2 522 546 IPR003591 -
Trre9g01165 989 SMART LRR_typ_2 474 497 IPR003591 -
Trre9g01165 989 SMART LRR_typ_2 140 164 IPR003591 -
Trre9g01165 989 SUPERFAMILY L domain-like 54 348 - -
Trre9g01165 989 Pfam Leucine rich repeat 523 583 IPR001611 GO:0005515
Trre9g01165 989 Pfam Leucine rich repeat 164 221 IPR001611 GO:0005515
Trre9g01165 989 Pfam Leucine rich repeat 380 438 IPR001611 GO:0005515
Trre9g01165 989 Pfam Leucine rich repeat 452 510 IPR001611 GO:0005515
Trre9g01165 989 Pfam Leucine rich repeat 596 655 IPR001611 GO:0005515
Trre9g01165 989 Pfam Leucine rich repeat 261 318 IPR001611 GO:0005515
Trre9g01165 989 Gene3D Transferase(Phosphotransferase) domain 1 893 975 - -
Trre9g01165 989 SUPERFAMILY Protein kinase-like (PK-like) 772 893 IPR011009 -
Trre9g01165 989 MobiDBLite consensus disorder prediction 738 761 - -
Trre9g01165 989 FunFam Piriformospora indica-insensitive protein 2 300 397 - -
Trre9g01165 989 SMART tyrkin_6 783 967 IPR020635 GO:0004713|GO:0006468
Trre9g01165 989 SUPERFAMILY RNI-like 323 672 - -
Trre9g01165 989 PRINTS Leucine-rich repeat signature 618 631 - -
Trre9g01165 989 PRINTS Leucine-rich repeat signature 405 418 - -
Trre9g01165 989 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 204 299 - -
Trre9g01165 989 Gene3D Phosphorylase Kinase; domain 1 755 858 - -
Trre9g01165 989 Gene3D Ribonuclease Inhibitor 162 419 IPR032675 -
Trre9g01165 989 Gene3D Ribonuclease Inhibitor 26 161 IPR032675 -
Trre9g01165 989 FunFam Putative LRR receptor-like serine/threonine-protein kinase 746 858 - -
Trre9g01165 989 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Trre9g01165 989 Gene3D Ribonuclease Inhibitor 420 555 IPR032675 -
Trre9g01165 989 PANTHER UNNAMED PRODUCT 293 899 - -
Trre9g01165 989 SMART LRR_sd22_2 282 308 - -
Trre9g01165 989 SMART LRR_sd22_2 618 641 - -
Trre9g01165 989 SMART LRR_sd22_2 570 593 - -
Trre9g01165 989 SMART LRR_sd22_2 402 428 - -
Trre9g01165 989 SMART LRR_sd22_2 210 236 - -
Trre9g01165 989 Gene3D Ribonuclease Inhibitor 556 690 IPR032675 -
Trre9g01165 989 ProSiteProfiles Protein kinase domain profile. 783 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g01165 989 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 26 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01165 Trre-Chr9 9409953 9413348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01165 894 989 Receptor kinase-like Gene Family AT4G36180 92.708 6.22e-45 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Trre9g01165 LRR_8 2.5e-08 CL0022
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01165 - - gmx:100795838 1163.67