Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01140 ATGGATTCGCTTCTAAAATTGCTGATCATAGATAACTTTAAGGAACCATTCTTTATGGCCATCATGTTCATCATACCACTAATACTTCTTTTGGGTTTAGTATCACTAATCCTCAAAAAGCCAAAATATCCACCTGGACCAAAAGGGTTACCTTTTATAGGTAACATGTTAATGATGAACCAATTAACCCACCGTGGTTTAGCCAACTTAGCCAAACAATACGGTGGCATCTTTCACCTACGAATGGGAATCCTCCACATGGTAACTATTTCTGACGCGGACACTGCTCGTCAAGTTCTCCAAGTTCAAGATAATATATTTTCTAATCGTCCAGCAACCCTAGCCATTAAATACCTAACTTACGACCGTGCTGACATGGCGTTCGCCCACTATGGTCCCTTTTGGCGCCAAATGCGAAAACTCTCCGTCATAAAGCTCTTTGGCCGAAAGCATGCAGAGTCATGGCAATCTGTTAGAGATGAGGTTGACCATACTGTTCGAACTGTTGCAGACAACATAGGCAACCCTGTGAATATCGGGGAGCTCGTGTTCAACTTAACTAAAAACATTATCTATCGAGCGGCTTTTGGGTCCAGCTCGAGAGAAGGACAAGATGAATTTATTGGGATATTGCAAGAGTTTTCCAAATTATTTGGAGCTTTTAATATTGCTGACTTTGTACCTTGTTTTGGAGCTATTGACCCTCAAGGGCTTAATGCTAGGCTTGTTAAGGCTCGTAAAGCGTTGGATAATTTCATAGACAAAATCATAGATGAACACATGCAAAAGAAAAAGGATGTTGGTGATGAAGAAACGGATATGGTGGATGAATTGCTTGCTTTCTATAGTGAGGAGGCTAAATTGAATAATGAATCGGACGATTTACAAAGTTCCATCAAACTTACCAAGGATAACATCAAAGCTATCATCATGGATGTGATGTTTGGAGGAACGGAAACAGTAGCCTCAGTAATTGAGTGGGCTATGTCTGAGCTAATAAAAAGTCCTGAAGATTTAAAAGAAGTCCAACAAGAGTTAGATGAGGTTGTGGGCCTGAACCGTAGAGTCGAAGAGTTCGATTTCGGGAAACTAACTTATCTCAAATGTGCTCTTAAAGAAACTCTACGCCTTCACCCACCAATTCCGTTGCTTCCCCATGAAACATCGGAAAATACAACGGTGAACGGTTATTTTATTCCAAAACGTGCGCGTGTGATAATTAATGCATGGGCTATTGGGAGAGACAAGAATTATTGGGAGGAACCTGAAAGTTTTAAACCGTCAAGGTTTTTGAAACCCGGAGTGCCCGATTTTAAGGGGAGTAATTTTGAATTTATTCCTTTTGGATCAGGTCGTAGATCTTGCCCTGGAATGCAGTTGGGTTTGTACGCGCTTGATTTAGCGGTGGCTCATTTGCTTCATTGCTTTACTTGGGAGTTGCCAGATGGAATGATACCGAGTGAAATGGATATGAGTGATGTCTTTGGACTTACTGCTCCTAGAGCGATTCGACTCATTGCTATTCCTACTAAGCGTGTCATGTGCCCTTTGGACTAG 1557 0.4143 MDSLLKLLIIDNFKEPFFMAIMFIIPLILLLGLVSLILKKPKYPPGPKGLPFIGNMLMMNQLTHRGLANLAKQYGGIFHLRMGILHMVTISDADTARQVLQVQDNIFSNRPATLAIKYLTYDRADMAFAHYGPFWRQMRKLSVIKLFGRKHAESWQSVRDEVDHTVRTVADNIGNPVNIGELVFNLTKNIIYRAAFGSSSREGQDEFIGILQEFSKLFGAFNIADFVPCFGAIDPQGLNARLVKARKALDNFIDKIIDEHMQKKKDVGDEETDMVDELLAFYSEEAKLNNESDDLQSSIKLTKDNIKAIIMDVMFGGTETVASVIEWAMSELIKSPEDLKEVQQELDEVVGLNRRVEEFDFGKLTYLKCALKETLRLHPPIPLLPHETSENTTVNGYFIPKRARVIINAWAIGRDKNYWEEPESFKPSRFLKPGVPDFKGSNFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMIPSEMDMSDVFGLTAPRAIRLIAIPTKRVMCPLD 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01140 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Trre9g01140 518 PANTHER CYTOCHROME P450 84A1-RELATED 20 517 - -
Trre9g01140 518 FunFam Cytochrome P450 84A1 36 511 - -
Trre9g01140 518 SUPERFAMILY Cytochrome P450 44 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01140 518 Pfam Cytochrome P450 44 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01140 518 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01140 518 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01140 518 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01140 518 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01140 518 Gene3D Cytochrome P450 38 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01140 518 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01140 518 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01140 518 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01140 518 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01140 518 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01140 518 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01140 518 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01140 518 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01140 518 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01140 518 CDD CYP71-like 73 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01140 Trre-Chr9 9170570 9173829 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01140 51 517 Monolignol Biosynthesis Gene Families AT4G36220 74.630 0.0 747
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01140 K09755 - gmx:100793538 815.839