Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01138 ATGGATTCGCTTCTATTATTGCCAATCATAGATAACTTTAAGGAAGAACCATACTTTATGTCCATCATGTTCATCATACCACTAGTACTTCTTTTGGGTTTAGTGTCACTAATCTTCAAAAAGCCAAAATATCCACCTGGACCAAATGGATTACCATTTATAGGTAACATGCTAATGATGGACCAATTAACCCACCGTGGTTTAGCCAACATAGCAAAACAATACGGTGGCATCTTTCACCTACGCATGGGATTCCTCCACATGGTAGCTATTTCTGACGCGGATGCGGCACGTCAAGTCCTTCAAGTTCAAGACAATATCTTTTCCAATCGTCCGGCGACCCTAGCCATAAAATATTTAACTTATGACCGTGCTGACATGGTATTTGCTCACTACGGACCCTTCTGGCGCAAGATGCGAAAACTTTGCGTCATGAAGCTTTTTAGCCGCAAGCACGCAGAGTCCTGGCAATCGGTTAGAGATGAGGTTGACCATGCTGTCCGAACTGTTACATACAACATAGGCAATCCCATGAACATTGGAGAGCTCGTGTTCAACTTAACCAAAAATGTTATCTATCGAGCGGCTTTCGGGTCGAGCTCCAGAGAAGGAGAAGATGAGTTTATTGGGATATTGCAAGAGTTTTCCAAATTGTTTGGAGCTTTTAATATTTGTGACTTTGTACCTTGTTTAGGAGCTATTGACCCACAAGGGCTTAATGCTAGGCTTGTTAAGGCTCGTAAAGCGTTGGATAGTTTTATAGACAAAATCATTGATGAACACATCCAGAAGAAGAACGATGTTGGTAATGAAGAAACGCATATGGTGGATGAATTGCTTGCTTTTTATAGTGAGGAGGGTAAATTGAATAATGAATCGGACGATTTGCAAAGTTCCATCAAACTTACCAAGGATAACATCAAAGCAATCATCATGGATGTGATGTTTGGAGGAACGGAAACAATAGCCTCATCGTTGCCTGATGGAATGAAACCGAGTGAAATGGATATGAGTGATGTGCTTGGACTCACTGCTCCTAAAGCGAGTCGACTCATTGCTATTCCTACTAAGCGTGTTTTGTGTCCTCTGAATTAG 1095 0.4155 MDSLLLLPIIDNFKEEPYFMSIMFIIPLVLLLGLVSLIFKKPKYPPGPNGLPFIGNMLMMDQLTHRGLANIAKQYGGIFHLRMGFLHMVAISDADAARQVLQVQDNIFSNRPATLAIKYLTYDRADMVFAHYGPFWRKMRKLCVMKLFSRKHAESWQSVRDEVDHAVRTVTYNIGNPMNIGELVFNLTKNVIYRAAFGSSSREGEDEFIGILQEFSKLFGAFNICDFVPCLGAIDPQGLNARLVKARKALDSFIDKIIDEHIQKKNDVGNEETHMVDELLAFYSEEGKLNNESDDLQSSIKLTKDNIKAIIMDVMFGGTETIASSLPDGMKPSEMDMSDVLGLTAPKASRLIAIPTKRVLCPLN 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01138 364 Gene3D Cytochrome P450 39 327 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01138 364 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01138 364 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01138 364 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01138 364 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01138 364 PANTHER CYTOCHROME P450 84A1-RELATED 21 325 - -
Trre9g01138 364 SUPERFAMILY Cytochrome P450 38 326 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01138 364 Pfam Cytochrome P450 45 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01138 Trre-Chr9 9134387 9140457 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01138 326 363 Monolignol Biosynthesis Gene Families AT4G36220 73.684 1.30e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01138 K09755 - gmx:100783430 496.893