Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01118 ATGGAATGGTTTATAGGTGTATGTGTGAGCATAATTGTTTTGTTAATAAGTTTTTGGTGGTTTGTGACGAAGAAGAAGAAGGAGAAAAATGGAAATAAAATACCAAAAGGAAATTCAGGTTGGCCTTTAATTGGAGAAACACTTGAGTTCATTGCTTCTGGCTATTCTTCTCAACCTGTCATCTTCATGGAAAATCGCAAGTCTATTTATGGGAGTGTGTTTAAGACAAATATATTGGGAAGCAATGTGATAATTTCAACAGATCCAGAAGTAAACAAGGTTATTCTGCAGAATCAAAGGAACATATTTGTCCCAGCTTATCCAAAATCAATTAGAGAATTAATGGGAGAACACTCAATACTCCAATTGAATGGAAACATGCATAAGAAACTTCATTCACTCATTGCAGTGTTTCTTAAATCTCCACAATTTAAAGCTCAAATCACCAAAAATATTCAACATTCTGTCAAACAGTGCTTAGCTTCTTGGACCAACAAATCAATATACTTTCAAGATGAAGTCAAAAAGATTACATTTACTATTTTAATTAAAGTTTTGATGAGCATTGGTCCTAGTGATGATTTGGATTTGTTGAAAAGAGAATTTGGAGAATACATCAAAGGCTTGATTTGCTTACCCATCAAGTTTCCAGGAACAACACTATACAAATCCTTGAAGGCTAAGGAAAGAATGATGAAGATGGTTAGGAAGATAGTAGAGGAGAGAATGAAGAAAATTAATGATAATAATGCAGAAGATCATTGTGCAGTGAATGATGTGGTGGATGCATTGTTAAGGGATAAGAGTGAGTTATACAACTCTAGCTCAAGTTCAAGCCTAGTGGTGGAAATGATTAGCCAAAACATTATAGAGTTTATGATCCCAGGAGAAGAGACCCTTCCTACAGCCATGACATTAGCCCTCAAATTTCTCTCTGACTCTCCTCTCGCTCTATCGAAACTTATGGATGAGAACATGGAATTGAAGAAGCAGAAGACTAATTGCTCAGATGATTATACATGGACTGACTACATGTCACCGCCATTTACTCAAAATGTCATCAGCGAAACTCTTAGAATGGCCAATATAGTGAATGGAATTTGGAGGAAAGCAGTCAAAGACGTCGAAATTAAAGGGTACCTAATTCCAAAAGACTGGTGTGTTATGGCATCTCTTACCTCGGTTCACATGGACGAAAAGAACTACGAAAACCCTTTTAAGTTTGATCCATGGAGATGGGAGAAAATTGGTGTTGTGGCTAGTAATAACTGCTTTACCCCATTTGGGAGTGGACATAGACTATGTCCTGGGTTAGAACTTTCAAGGCTAGAACTCTCTATTTTCCTTCACCATCTTGTTACTACATATAGATGGGTGGCTGAGAGAGATGAAATAATATACTTTCCAACTGTTAAGATGAAGAAAAAGCTCCCAATTAGAGTGCAACCAATTAATGCTTGA 1461 0.3648 MEWFIGVCVSIIVLLISFWWFVTKKKKEKNGNKIPKGNSGWPLIGETLEFIASGYSSQPVIFMENRKSIYGSVFKTNILGSNVIISTDPEVNKVILQNQRNIFVPAYPKSIRELMGEHSILQLNGNMHKKLHSLIAVFLKSPQFKAQITKNIQHSVKQCLASWTNKSIYFQDEVKKITFTILIKVLMSIGPSDDLDLLKREFGEYIKGLICLPIKFPGTTLYKSLKAKERMMKMVRKIVEERMKKINDNNAEDHCAVNDVVDALLRDKSELYNSSSSSSLVVEMISQNIIEFMIPGEETLPTAMTLALKFLSDSPLALSKLMDENMELKKQKTNCSDDYTWTDYMSPPFTQNVISETLRMANIVNGIWRKAVKDVEIKGYLIPKDWCVMASLTSVHMDEKNYENPFKFDPWRWEKIGVVASNNCFTPFGSGHRLCPGLELSRLELSIFLHHLVTTYRWVAERDEIIYFPTVKMKKKLPIRVQPINA 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01118 486 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01118 486 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01118 486 PRINTS P450 superfamily signature 295 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01118 486 PRINTS P450 superfamily signature 435 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01118 486 Coils Coil 318 338 - -
Trre9g01118 486 CDD CYP90-like 66 483 - -
Trre9g01118 486 PRINTS E-class P450 group IV signature 347 363 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01118 486 PRINTS E-class P450 group IV signature 61 84 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01118 486 PRINTS E-class P450 group IV signature 435 453 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01118 486 PRINTS E-class P450 group IV signature 396 414 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01118 486 PRINTS E-class P450 group IV signature 419 435 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01118 486 PANTHER CYTOCHROME P450 26 32 466 - -
Trre9g01118 486 Pfam Cytochrome P450 35 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01118 486 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 24 484 - -
Trre9g01118 486 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
Trre9g01118 486 Gene3D Cytochrome P450 22 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g01118 486 SUPERFAMILY Cytochrome P450 33 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01118 Trre-Chr9 8975889 8979950 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01118 28 457 Cytochrome P450 AT3G13730 49.652 1.03e-158 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01118 K12637 - gmx:100799030 770