Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01108 ATGCAAGCATTTGTTCTGAAAAAGTACTCGGCGCAACTCACGGTTTCCGCTTTTACTTGCTTCTTTGGTGTTGTGCAGTTTGGGACAATTGCAGCCTTTCTTGAGAGGGATCCCAAATCTTGGAAGCTCAATTCCATTGAAGAGGTCTACAGTATTTTGTACTCGGGACTGGTGATTTCCGGGATGACAGCAGCGATACAAATATGGACTATTAGCAAAGGAGGGCCAGTGCTTGCTTCAATTTATCTTCCCTTACAGACAATACTTGTAGCTTTGATGGCGCCCATTGTTTTCGGTGAAGAATTCTTCTTGGGAGGGATTATTGGAGCTTTCTTAATTATATCTGGCTTATACCTTGTTGTCTGGGGAAGAAGTGAAGAAACTAAGTTTGCTGAGGAGAATCATTTGAAAGAAAAAAGTGACAGTTCTTCCCTCATACAACCATTGATTCCTGTCCACAATTCTTAG 468 0.4188 MQAFVLKKYSAQLTVSAFTCFFGVVQFGTIAAFLERDPKSWKLNSIEEVYSILYSGLVISGMTAAIQIWTISKGGPVLASIYLPLQTILVALMAPIVFGEEFFLGGIIGAFLIISGLYLVVWGRSEETKFAEENHLKEKSDSSSLIQPLIPVHNS 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01108 155 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 125 - -
Trre9g01108 155 PANTHER WAT1-RELATED PROTEIN 2 135 IPR030184 GO:0016020|GO:0022857
Trre9g01108 155 Pfam EamA-like transporter family 6 121 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01108 Trre-Chr9 8900513 8901537 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01108 2 150 Nodulin-like Gene Family AT1G75500 50.000 7.58e-51 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01108 - - psat:127120200 233.417