Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01107 ATGCGAAAATGCAGATATGAGAGCTTACACTTAAATAGGATAAATGGTATGGCTAAGGTTCTTGGAGTACTTGCTTCTGTTGGAGGAGCTTCAATCATTACCCTTTACAAAGGACCTACCATTTATGCTCCAAATCTAGAACTTCATCAAAGAGAAATTTTTTTGTCTTTATTTGAGGATGCAAATGGGAAAAATTTGAACTTGGGTGGTATCCTTCTATTTGGTCACTGCTTGTGTTGGTCTGGTTGGATTGTGATGCAAGCATTTGTTCTGAAAAAGTACTCGGCGCAACTCACGGTTTCCGCTTTTACTTGCTTCTTTGGTGTTGTGCAGTTTGGGACAATTGCAGCCTTTCTTGAGAGGGATCCCAAATCTTGGAAGCTCAATTCCATTGAAGAGGTCTACAGTATTTTGTACTCGGGACTGGTGATTTCCGGGATGACAGCAGCGATACAAATATGGACTATTAGCAAAGGAGGGCCAGTGCTTGCTTCAATTTATCTTCCCTTACAGACAATACTTGTAGCTTTGATGGCGCCCATTGTTTTCGGTGAAGAATTCTTCTTGGGAGGGATTATTGGAGCTTTCTTAATTATATCTGGCTTATACCTTGTTGTCTGGGGAAGAAGTGAAGAAACTAAGTTTGCTGAGGAGAATCATTTGAAAGAAAAAAGTGACAGTTCTTCCCTCATACAACCATTGATTCCTGTCCACAATTCTTAG 723 0.4039 MRKCRYESLHLNRINGMAKVLGVLASVGGASIITLYKGPTIYAPNLELHQREIFLSLFEDANGKNLNLGGILLFGHCLCWSGWIVMQAFVLKKYSAQLTVSAFTCFFGVVQFGTIAAFLERDPKSWKLNSIEEVYSILYSGLVISGMTAAIQIWTISKGGPVLASIYLPLQTILVALMAPIVFGEEFFLGGIIGAFLIISGLYLVVWGRSEETKFAEENHLKEKSDSSSLIQPLIPVHNS 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01107 240 Pfam EamA-like transporter family 68 206 IPR000620 GO:0016020
Trre9g01107 240 PANTHER WAT1-RELATED PROTEIN 6 219 IPR030184 GO:0016020|GO:0022857
Trre9g01107 240 SUPERFAMILY Multidrug resistance efflux transporter EmrE 130 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01107 Trre-Chr9 8900258 8901537 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01107 5 235 Nodulin-like Gene Family AT1G75500 49.402 3.94e-80 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01107 - - psat:127120200 347.821