Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01106 ATGGTGGATGAACGAGCTAAGCTTCACATAGCCTTAACTTTTTTACAATTTTGTCATGCAGGAAATCATATATTTCTCAGACTTGCACTTAATACAGGAGTTAGCAAGCTTGTTTTTCCTGTCTATAGAAACATCACTGCTTTCATTCTTCTAGCTCCACTTGCATATTTCACAGAAAAGAAAGATAGGCCACCAATAACCAGTTATTGTCTGCTACAGTTTTTCCTTCTTGGACTTGTTGGAATAACATTGAAAGAAGGATTTTACCTCTTTGGTTTGGACAACACATCACCAACATTTGCTTCTGCTATGCAAAATTCTGTTCCAGCCCTTACATTTCTGCTGGCTGTGATACTAAGTTAA 363 0.3719 MVDERAKLHIALTFLQFCHAGNHIFLRLALNTGVSKLVFPVYRNITAFILLAPLAYFTEKKDRPPITSYCLLQFFLLGLVGITLKEGFYLFGLDNTSPTFASAMQNSVPALTFLLAVILS 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01106 120 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 119 - -
Trre9g01106 120 Pfam EamA-like transporter family 16 119 IPR000620 GO:0016020
Trre9g01106 120 PANTHER WAT1-RELATED PROTEIN 10 117 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01106 Trre-Chr9 8899317 8900182 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01106 2 120 Nodulin-like Gene Family AT3G53210 65.546 1.01e-51 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01106 - - psat:127120200 228.794