Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g01022 ATGGGTGGCATTGGCGACCAACTAGTAGCATGTTATCAAGTGGTTGTGCATAATCCCAGTCAAATATGGCAAACTGAAAAAATTCTAACAAATGAACTCTCTGTTCTTGCCATTCAACTTGTCTTTACCGTAGTTTTGTCTCGTCTTTTATTTTGTATCTATAAACCTCTTCATCAACCTCGTCTCATTTCACAAATCTCCGTTGGTGTTCTACTAATTCAAGTACTTGGAAACTTTCCATCTATTTACTTCAATATTTATCCTGTAACTGGGATGATTAACATTGACGTTCTAACACATGTTGGTATTGTATACTACGCATTCCTCAGTGGTTTAGAGATGAACTTGAATACCATTTTACATGCAAATAAGAAAGCCGCAACCATTGCGATTTCAGGAATCATCTTTCCAATAGTGATGGGACCAACTTTATATGCTCTACATCGAAAAGTTTATGCCAATGTTGATGTATATCCACTTGAAGAAAGTACAGTGAATGCTTATATACTATGGACTTTAGTTCTGACTGTAACAGGTTTTCCAGTTGTAGTTCATTCACTTTCTGAGCTCAAACTACTTTATACTAGTCTTGGTAAGGATGCATTAACATCAGCTATGATAAGTGACACATATGGTTGGATTTTATTCACATTATTTGTTCCATTTGCAATTGATGGTACAAGGGCAATATACTCGGTATTAAGCACCATAATATTTGTTTTAATATGCATCTATGTTGTGCGTCCTATTGTTGTAAAAGTTATTGATCACAATACAGAAAGAGATGAATGGGATGATAATCAATTACTCTTTGTGGTGATGGGAATTTTCGTTTGTGCATACATAACGGATACTCTTGGCACACATAGCGTTGTTGGGGCTTTTGTGTACGGGTTGATTTTACCTCACGGTAAATTTGCTGACATGGTGGCGTCAATGACCGATGATTTTGGTGGAGCATTTCTAGCACCGCTCTTCTTTAGTGGCAGTGGAATGCGACTCATGATGAGTAACATTTTCAAACACAAGAATTGGCCTTTGACTCTTATGGTTATAATCTTGTTGAGTCTTCCAAAGATTTTAAGCACTTTGTTTGCCACTTTCTTTTTTGGCATGCGTACTCGTGATAGTTTTGCTCTAGGGTTAATTCTTAATACCAAAGGTGCTATTGCACTAATAATGCTCAATACTGCTTGGGATAAATCGATTCTTTCTGGACCAACTTACAGTGTTTTAACCTCTGGAGTCCTTTTAATGACTATAGTGGTGCCTCCCATCATAAATATCATATACAAGCCTAGAAAGCGATTTGAACAAAACATGTTAAAGACTATAGAGAAGCTAAGACTTGATGCAGAGCTCAGGATTCTAGCATGTGTTCATAATACTCGCCAAGCTACAGGGATTATTAGCCTCATCGAATCTTTCAATGCCACCAGGCTTTCACCTATACATGTTTTTTCACTTTACCTTGTTGAGCTCACAGGACGTGCTGGTGCACTTGTTGCAGCTCATATGGAAAAGCCTAGTGCCCAACCCAGAGCACAAAATCTTACAAGATCTCAAGAAGAGCTAGAGAGCATTAACAAGACCTTTGGAGCATTTGGAGAAACATATGATGTTGTTAGAGTGGAAACCTTAAATGTTGTATCATCTTATGCAACCATTCACAAGGACATATACAACTCCGCTAATGATAAACGAACAAGTTTGATTATCCTTCCATTCCACAAACAAGTAACTTCAGATGGTGCACTTCAAATAACCAATATTGTGCACAAAGATATAAATGTGAATGTGATGCAAAGTGCACCTTGCTCTGTCGGAATCTTTGTTGATCGTGATCTTGGGAGATTATCGAAAATGAAATTTTCTATTTGTATGATCTTTATTGGAGGCCCCGACGATCGTGAAGCCTTAGCTGTTGCATGGAGGATGGCTAGGCACCCAGGAACTCAATTATCAGTGGTTCGAATGCTCTTGTTTGATGAAGCTGCAGAAGTAGACACCTCATGTCATATTGAAGCACAAGGCATACTATCTGTTGTAATGGATAGTGATATGCAAAATGACTTAGATGACGAGTACGTGAATTCTTTTAGACTCACAGCAGTAAACAACAATGATTCTATATCCTATTCAGAGGTTGATGTTCATTCAGGTGAAGATATTCCTATAGTCCTCAATGAGCTAAAACAATTTGGCTGTGATTTATACATAGTTGGACAAGGGAATCATAGAAACTCACGAGTCTTTTCAAATTTATTGGAATGGTGTGATTGTCTAGAACTTGGAGTTATAGGGGATATGTTGGCATTAGACAATTTTGGAGCTCGCTCATCTGTACTAGTTGTGAAACAATATGGGTATGGAGAAATGGTTTTGCGAAATCAACACAGCCATTTAACAACTAATAACAATGGTATTGGGGCACTTATCGTGAAGACAGAATAA 2454 0.3773 MGGIGDQLVACYQVVVHNPSQIWQTEKILTNELSVLAIQLVFTVVLSRLLFCIYKPLHQPRLISQISVGVLLIQVLGNFPSIYFNIYPVTGMINIDVLTHVGIVYYAFLSGLEMNLNTILHANKKAATIAISGIIFPIVMGPTLYALHRKVYANVDVYPLEESTVNAYILWTLVLTVTGFPVVVHSLSELKLLYTSLGKDALTSAMISDTYGWILFTLFVPFAIDGTRAIYSVLSTIIFVLICIYVVRPIVVKVIDHNTERDEWDDNQLLFVVMGIFVCAYITDTLGTHSVVGAFVYGLILPHGKFADMVASMTDDFGGAFLAPLFFSGSGMRLMMSNIFKHKNWPLTLMVIILLSLPKILSTLFATFFFGMRTRDSFALGLILNTKGAIALIMLNTAWDKSILSGPTYSVLTSGVLLMTIVVPPIINIIYKPRKRFEQNMLKTIEKLRLDAELRILACVHNTRQATGIISLIESFNATRLSPIHVFSLYLVELTGRAGALVAAHMEKPSAQPRAQNLTRSQEELESINKTFGAFGETYDVVRVETLNVVSSYATIHKDIYNSANDKRTSLIILPFHKQVTSDGALQITNIVHKDINVNVMQSAPCSVGIFVDRDLGRLSKMKFSICMIFIGGPDDREALAVAWRMARHPGTQLSVVRMLLFDEAAEVDTSCHIEAQGILSVVMDSDMQNDLDDEYVNSFRLTAVNNNDSISYSEVDVHSGEDIPIVLNELKQFGCDLYIVGQGNHRNSRVFSNLLEWCDCLELGVIGDMLALDNFGARSSVLVVKQYGYGEMVLRNQHSHLTTNNNGIGALIVKTE 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g01022 817 PANTHER CATION/H + ANTIPORTER 21 789 - -
Trre9g01022 817 Gene3D - 34 440 IPR038770 -
Trre9g01022 817 Pfam Sodium/hydrogen exchanger family 40 429 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g01022 Trre-Chr9 8061214 8064100 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g01022 6 788 Antiporter Super Family AT2G13620 36.101 4.35e-168 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g01022 - - gmx:100800072 1171.76