Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00990 ATGACCGGCGGCGGATCGTCGGGAAGATTACCGACATGGAAAGAAAGAGAAAACAATAAGAGAAGAGAGAGAAGACGAAGAGCTATTGCTGCTAAGATCTATTCAGGTCTTCGTTCTCAAGGTAACTTCAAGCTTCCTAAACACTGTGATAATAACGAGGTATTGAAAGCTCTTTGTTCAGAAGCTGGTTGGATCGTTGAAGAAGATGGAACTACTTATAGAAAGGGAAGTAAGAGACCGCTACCGAATGAGATGGGAGGAACTCCACCAAATATGAGTGCTTGTTCTTCACTTCAACCAAGTCCACAATCTTCATCATTCCCAAGTCCACAATCCTCTTCTTTTCCAAGTCCAATACCATCCTACCATGCGAGTCCAACTTCATCGTCTTTCCCAAGTCCATCTCGCATGGATGGAATTTCAAACTCGTCTTCCTTTCTTCTTCCGTTCATCCGAAACATAACTTCAATCCCCACAAATCTTCCACCCCTTAGGATTTCTAATAGTGCTCCTGTTACACCACCACTTTCTTCACCTAGAAGTTCAAAGCGAAAAGCAGATTTTGAATCCCTCTCTAATGGTTCCTTTAACTCCTCATTTCGCCACCCACTTTTTGCTACTTCTGCACCATCAAGTCCCACGCGCCGTAACCACTTACCTCCTTCAACCATTCCGGAGTGTGATGAGTCAGATGCTTCTACGGTGGATTCTGGTCGATGGGTTAGTTTTCAGACAATAGGTGCCCACGGTGCGGCTCCTCCTTCCCCTACTTTTAATCTCATGAAACCAGTAATGCAGAAGATCACTCCTCAGAGTTCGATGGATATGATTCATATGAATGAAGCCATGCAATGGAGTTCTGGTTCAGCTGCTGAGAGAGGTAGAGGCTCAGATTTTGACTTTGAAAATGGCAGAGTGGTGAAACCGTGGGAAGGTGAGAGAATTCACGAGGTAGGAGTGGATGAATTGGAGCTTACTCTGGGGTTTGGTAAGGCCTAA 999 0.4494 MTGGGSSGRLPTWKERENNKRRERRRRAIAAKIYSGLRSQGNFKLPKHCDNNEVLKALCSEAGWIVEEDGTTYRKGSKRPLPNEMGGTPPNMSACSSLQPSPQSSSFPSPQSSSFPSPIPSYHASPTSSSFPSPSRMDGISNSSSFLLPFIRNITSIPTNLPPLRISNSAPVTPPLSSPRSSKRKADFESLSNGSFNSSFRHPLFATSAPSSPTRRNHLPPSTIPECDESDASTVDSGRWVSFQTIGAHGAAPPSPTFNLMKPVMQKITPQSSMDMIHMNEAMQWSSGSAAERGRGSDFDFENGRVVKPWEGERIHEVGVDELELTLGFGKA 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00990 332 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 328 IPR033264 GO:0003700|GO:0006351|GO:0009742
Trre9g00990 332 MobiDBLite consensus disorder prediction 206 231 - -
Trre9g00990 332 MobiDBLite consensus disorder prediction 159 180 - -
Trre9g00990 332 MobiDBLite consensus disorder prediction 89 138 - -
Trre9g00990 332 MobiDBLite consensus disorder prediction 73 138 - -
Trre9g00990 332 MobiDBLite consensus disorder prediction 1 25 - -
Trre9g00990 332 MobiDBLite consensus disorder prediction 159 190 - -
Trre9g00990 332 Pfam BES1/BZR1 plant transcription factor, N-terminal 6 143 IPR008540 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00990 Trre-Chr9 7731534 7733178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00990 9 332 BZR Transcription Factor Family AT1G75080 56.509 9.99e-97 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Trre9g00990 BES1_N 2.6e-58 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00990 K14503 - gmx:100795837 425.631