Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00976 ATGCATCTCTTTCCCTTCACCCCTCTTTTCATTTTCACACTCTTTTTCTCTACTACCAAAATCTCCATCATCCTAGGACAACAACCTTACATTGGTTTAGCAACAACAGCATGTCCTCGAAAAGGCGATGCAAAATCAATCCGAGGCTACACATGTAACGGCGAAACTCAAACATGTCAAGCATACCTCACCTTCAAAACTCAACCAATTTACTCCTCAGTTTCAACAATATCAACTTTACTAGGCTCAAACCCGTCTCAACTCGCCGAAATAAACTCCGTTTCATTAAACGAAACATTCGAAACAAACAAAATGGTAATTGTTCCTGTTAATTGTTCTTGTTCAGCTAATTCACTTACTTTAACACAAGCTACAATTTATCCCTTTACAACACTTCTTATTCCTCTTTTTGATAAGCCTTCAAGTTCTCAAATTCAACCGGTTTCGGTTTCGCCACCTCAACAACCTTCTCCTTCATCGTCCTCGCCTTCTTCAACCGATAAAAAATCGAAAAAAACTTTGGTTTATGTTGTGATTGGAGTACTTGTAGTTTTAGCTTTGATATTAGTTCTATATGGTTTTATTTTCTTTAATAAGGGTAAAAAGAAAAATGATTCTTTGGTGAATGTTTCTGAGAGTACTATTACTAGTTATGAGGCGAAAGAGAAACCGGTGAAGAAAGAAGAAGAAAAATTGTTAGAGATTATTATATCCGGTATAGCTCAATCTTTCAAAGTGTATGATTTTGATGAAATTAAGATTGCAACAAATGATTTTAGTCCAAGTTGTTTGATCAAAGGAAATGTTTATCGCGGTGTTATTAACGGCGATTTAGCTGCAATTAAGAAAACAGAAGGAGATGTTTCAAAAGAGATACAAATTCTTAACAAAGTTAATCATTCTAATGTTATTCGTCTTTCGGGTGTTAGCTTCAATGAAGGACATTGGCTTGCAAGATGTGTTGAAGGAGTTGAAAATGATGAAGAATTTGTTGCTACAAGACATATTATTGGGACCAGAGGTTACATGGCACCAGAATATTTAGAAAATGGTATTGTTTCTACAAAGATTGATGTTTATGCATTTGGTGTGTTGATGTTGGAAATGATTACAGGAAAAGAGGTTGGTTTTATTTTGTCTAAAGATAATGAGAATTTGTTGGATGTTTTGAGTGGAATAGTGTGTAAGGAAAGTTGTGATGAGAAGTTGAAGGAGTTTATGGATCCTTCATTGGAAGGAAATTATCCAATTGAACTTGCTATGTTTGTGATTGAAATTATTGATGATTGTTTGAAGAAAGATCCAGTAGATCGTCCTGAAATGGATGAGATTGTACCAATTTTGTCAAGAACTTTGAACTCTTCATTGAGTTGGGAAATGTCAGTGAATAATGTTTCTACGAAGCAGAAACACTCCTTGAATTAG 1425 0.3481 MHLFPFTPLFIFTLFFSTTKISIILGQQPYIGLATTACPRKGDAKSIRGYTCNGETQTCQAYLTFKTQPIYSSVSTISTLLGSNPSQLAEINSVSLNETFETNKMVIVPVNCSCSANSLTLTQATIYPFTTLLIPLFDKPSSSQIQPVSVSPPQQPSPSSSSPSSTDKKSKKTLVYVVIGVLVVLALILVLYGFIFFNKGKKKNDSLVNVSESTITSYEAKEKPVKKEEEKLLEIIISGIAQSFKVYDFDEIKIATNDFSPSCLIKGNVYRGVINGDLAAIKKTEGDVSKEIQILNKVNHSNVIRLSGVSFNEGHWLARCVEGVENDEEFVATRHIIGTRGYMAPEYLENGIVSTKIDVYAFGVLMLEMITGKEVGFILSKDNENLLDVLSGIVCKESCDEKLKEFMDPSLEGNYPIELAMFVIEIIDDCLKKDPVDRPEMDEIVPILSRTLNSSLSWEMSVNNVSTKQKHSLN 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00976 474 ProSiteProfiles Protein kinase domain profile. 85 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g00976 474 Gene3D Phosphorylase Kinase; domain 1 234 316 - -
Trre9g00976 474 Gene3D Transferase(Phosphotransferase) domain 1 317 470 - -
Trre9g00976 474 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 10 117 - -
Trre9g00976 474 SUPERFAMILY Protein kinase-like (PK-like) 244 454 IPR011009 -
Trre9g00976 474 Pfam Protein kinase domain 329 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g00976 474 MobiDBLite consensus disorder prediction 144 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00976 Trre-Chr9 7564507 7566462 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00976 317 461 Receptor kinase-like Gene Family AT2G33580 40.667 5.13e-30 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Trre9g00976 Pkinase 1.8e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00976 - - pvy:116129117 211.846