Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00974 ATGGCTATCTTCTTTCTTCCATCTAGTTCTCATGCTCTTTTTCTTGCATTTATGTTGTTTTTTCTCACTAATATCTCAGCTCAACCTCTACAAATCAGTGAAACAAACTTTTCATGCACGGCCGATTCACCTCCTTCATGTGATACCTATGTGACATACTTTGCCAAATCTCCGAATTTCTTGAGCCTAACAAACATATCTGATATATTTGATATGAGTCCTTTATCCATTGCAAAAGCCAGTAACATAGAAGATGAAGATAAAAAGCTGATTCAAGGACAAGTCTTACTAGTACCTGTAACTTGCGGTTGCGCTAGAAATCGCTATTTCGCAAATTTCACTTATACAATCAAGCTAGGTGACAACTACTTCATAGTTTCAACCACTCAATACCAGAATCTCACCAATTATAAGGAAATGGAAGATTTCAACCCAAATCTAAGTCCAAATCTATTGCCACAAGAAATCAAAGTTGTTGCCCCTTTATTCTGCAAGTGCCCTTCAAAGAATCAGTTGAATAAAGGAATAAAGTATCTGATTACTTATGTCTGGCAAGCTAATGATAATATTACCCTTGTAAGTTCGAAGTTTGGTGCATCACAAGCGGACATGTTTGCCGAGAACAGTCTGAAGTTCACTGCTGAAACCAATGTTCCAATTTTAATCCCAGTGACAAAGTTACCAGAACTCGATCAACCGTCTTCAAATGGAGGAAAAAGCAGCATTCAAAAACTTCCTGTTATAATTGGTATTAGCCTAGGAAGTATTTTTTTCATTGTAGTTTTAACACTATCACTTGTGTATGTATATTGTCTCAAAATGAAGAGATTGAATAGGACTGCTTCGTTGGCCGATACTGCGGATAAGTTACTTTCAGGTGTTTCAGGATACGTAAGCAAGCCAACAATGTATGAAATGGATGTGATCATGGAAGCTACAATGAACCTGGATGAGAATTGTAAGATTGGTGAAACAGTCTACAAGGCTAATATAGATGGCAGAGTTTTAGCAGTGAAAAACATCAAGAAAGATGCTTCTGAGGAGCTGAAAATTCTGCAGAAGGTAAATCATGGAAATCTTGTGAAACTAATTGGTGTATCTTCTGACAATGATGGAAACTGTTTCCTTGTTTATGAGTATGCTCAAAATGGATCACTTGATGAGTGGCTGTTCTCAGAATCGTCGAAAGCTTCGAACTCGGTCGGCTCGCTTACATGGTCTCAGAGAATAACCATAGCAATGGATGTTGCAGTAGGTCTACAATACATGCATGAACATACTTATCCAAGAATAATCCACAGAGACATCACAACAAGTAATATCCTTCTTGATTCAAACTTTAAGGCCAAGATAGCGAATTTTTCTATGGCTAGAACTTCGACAAACAACTTGATGCCGAAAATAGATGTTTTCGCTTTCGGGGTGGTTATGATAGAATTGCTTACCGGCAAGAAAGCGGTAACAACGAAGGAAAATGGGGAGGTTGTTATTTTGTGGAAGGACTTCTGGAAGATTTTTGATATAGAAGGGAATAGAGAAGAAAGACTAAGAAAATGGATGGATCCTAAGTTAGAGGACTTCTATCCTATTGAACAAGCCCTAAGTTTGGCTTCTTTGGCAGTGAATTGTACTGCAGATAAATCATTGTCAAGACCAAGTATTGCAGAGATTGTTCTCTGTCTTTCTCTTCTCAATCAACCATCGTCTGAACCAATGTTGGAAAGATCTTTGACATCTGGTTTAGATGCCGAAGCTACTCATGTTGTTACTTCTATCGCAGCTCGTTGA 1788 0.3798 MAIFFLPSSSHALFLAFMLFFLTNISAQPLQISETNFSCTADSPPSCDTYVTYFAKSPNFLSLTNISDIFDMSPLSIAKASNIEDEDKKLIQGQVLLVPVTCGCARNRYFANFTYTIKLGDNYFIVSTTQYQNLTNYKEMEDFNPNLSPNLLPQEIKVVAPLFCKCPSKNQLNKGIKYLITYVWQANDNITLVSSKFGASQADMFAENSLKFTAETNVPILIPVTKLPELDQPSSNGGKSSIQKLPVIIGISLGSIFFIVVLTLSLVYVYCLKMKRLNRTASLADTADKLLSGVSGYVSKPTMYEMDVIMEATMNLDENCKIGETVYKANIDGRVLAVKNIKKDASEELKILQKVNHGNLVKLIGVSSDNDGNCFLVYEYAQNGSLDEWLFSESSKASNSVGSLTWSQRITIAMDVAVGLQYMHEHTYPRIIHRDITTSNILLDSNFKAKIANFSMARTSTNNLMPKIDVFAFGVVMIELLTGKKAVTTKENGEVVILWKDFWKIFDIEGNREERLRKWMDPKLEDFYPIEQALSLASLAVNCTADKSLSRPSIAEIVLCLSLLNQPSSEPMLERSLTSGLDAEATHVVTSIAAR 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00974 595 SUPERFAMILY Protein kinase-like (PK-like) 302 563 IPR011009 -
Trre9g00974 595 FunFam Os07g0541700 protein 381 470 - -
Trre9g00974 595 Pfam Protein tyrosine and serine/threonine kinase 342 461 IPR001245 GO:0004672|GO:0006468
Trre9g00974 595 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 14 566 - -
Trre9g00974 595 Gene3D Phosphorylase Kinase; domain 1 292 380 - -
Trre9g00974 595 Gene3D Transferase(Phosphotransferase) domain 1 463 578 - -
Trre9g00974 595 Gene3D Transferase(Phosphotransferase) domain 1 381 462 - -
Trre9g00974 595 ProSitePatterns Tyrosine protein kinases specific active-site signature. 431 443 IPR008266 GO:0004672|GO:0006468
Trre9g00974 595 ProSiteProfiles Protein kinase domain profile. 284 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00974 Trre-Chr9 7556281 7558068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00974 81 564 Receptor kinase-like Gene Family AT3G21630 30.970 1.83e-66 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Trre9g00974 PK_Tyr_Ser-Thr 4.1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00974 - - cam:101515074 874.004