Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00972 ATGGAAGCTCAACTTTCCTTCTTTGTTATTCCCTTATTTCTTTTGTTCCTATTACATAACTTCCTAGCAAAATATTACAAGCCAAATCCAAGCCTTGACAAATTGCCACCTGGTCCAATTAAATTTCCACTCATTGGTAACCTTCATCAACTAGCCATGTCAAGAAAACTTCCACATCATGCTCTAAGAGAACTTGCACAAAAATATGGACCTCTTATGCACCTACAACTTGGTGAAATTTCCACCGTGATTGTATCCTCCCCCAAATTGGCAAAAGAAGTAATGAAAACCCATGATGTTGCTTTTTCCAATAGGCCCAAACTTCTTTCCCCTGAAATTATGGGCTATGGCTCAAAAGATATTGTATTTTCTCCATATGGTGAATTTTGGAAACAAATGAGAAAAATATGTGTATTAGAGCTTCTAAGTGCTAAAAGGGTTCAATCTTTCTCTTATATTAGAGAAGATGAGAATGCAAAATTCATACAATCAATTCAATCATCAGCAAACTCTACAATAAATCTCACTAGTAGAATTTTCTCAATGGTGACTTCCGTTATTTCTAGAGCAGCGTTTGGTGACAAATCAAATGATCAAGATGAATTTGTTGATTTGGTTAGAAAAGTTGTAGAATTGGCGGCGGGATTTGATGTTGATGATTTGTTTCCTTCGATTAAATTGTTACATAAACTAACAGGGATGAAGCCGAAATTGGAGAAAATCCACAAACGGGTAGACGAAATCATAGAAAATATTGTTAAACAACATGAAGAAAAGCAAGCAAAAGGAAAAGAAAACAACAACAACAACAACAAAGTTGAGAATGAAGATCTTGTGGATGTTCTTTTGCGAATCCAAGAAAGTGATAACCTAGATATCCAAATAACAACCAATAATATCAAAGCTGTAATTTGGGACGTATTTGTGGCTGGAACTGATACAACAGCAACAACGATAGAGTGGGCTATGTCTGAAATGATGAAGAATCCAAGTGTGCGGGAGAAAGCACAAGCTGAATTAAGACAAACATTAAGAGGGAAGAAAATAATATATGAATCTGATCTCCATGAACTTACTTACTTAAAGTTAGTGATCAAAGAGACATTGAGGTTACATCCACCATCTCCTTTGTTGGTCCCCAGGGAATGCACTGAATTGACCATCATTGATGGGTATCAAATACCAAAAGGTACTAAAGTCATGATAAACGCATGGGCTATGGCAAGAGATCCTGAACATTGGACTGATGCTGAGATGTTCATCCCAGAGAGGTTTGATGGTAGTTTACTTGATTTCAAAGGGAATAATTTTGAGTATATTCCTTTTGGAGCTGGAAGGAGAATGTGTCCGGGTATATCATTTGGTTTAGCTAGTATTGTTCTTCCACTTGCTCTATTACTTTACCACTTCAATTGGGAACTTCCAAATCAAATGAAACCAAAGGATTTGGATATGACTGAACATTTTGGATTGGCAGTTGGAAGGGAAATTGAGTTGTGTTTGATTCCTAGTGTATATATTATGTAA 1527 0.3615 MEAQLSFFVIPLFLLFLLHNFLAKYYKPNPSLDKLPPGPIKFPLIGNLHQLAMSRKLPHHALRELAQKYGPLMHLQLGEISTVIVSSPKLAKEVMKTHDVAFSNRPKLLSPEIMGYGSKDIVFSPYGEFWKQMRKICVLELLSAKRVQSFSYIREDENAKFIQSIQSSANSTINLTSRIFSMVTSVISRAAFGDKSNDQDEFVDLVRKVVELAAGFDVDDLFPSIKLLHKLTGMKPKLEKIHKRVDEIIENIVKQHEEKQAKGKENNNNNNKVENEDLVDVLLRIQESDNLDIQITTNNIKAVIWDVFVAGTDTTATTIEWAMSEMMKNPSVREKAQAELRQTLRGKKIIYESDLHELTYLKLVIKETLRLHPPSPLLVPRECTELTIIDGYQIPKGTKVMINAWAMARDPEHWTDAEMFIPERFDGSLLDFKGNNFEYIPFGAGRRMCPGISFGLASIVLPLALLLYHFNWELPNQMKPKDLDMTEHFGLAVGREIELCLIPSVYIM 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00972 508 Coils Coil 256 276 - -
Trre9g00972 508 CDD CYP71-like 68 499 - -
Trre9g00972 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Trre9g00972 508 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00972 508 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00972 508 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00972 508 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00972 508 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00972 508 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00972 508 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00972 508 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00972 508 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00972 508 Pfam Cytochrome P450 36 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00972 508 SUPERFAMILY Cytochrome P450 36 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00972 508 PANTHER OS08G0105600 PROTEIN 60 506 - -
Trre9g00972 508 FunFam Cytochrome P450 71D8 29 503 - -
Trre9g00972 508 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00972 508 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00972 508 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00972 508 Gene3D Cytochrome P450 31 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00972 Trre-Chr9 7541366 7543136 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00972 14 505 Cytochrome P450 AT3G26310 40.637 1.22e-134 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00972 - K15472 gmx:100783298 686.411