Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00935 ATGGCTGATTCCACTCCAACTGCATCTACTTCTAATGGCACCCCCACATATTCTTGTTTCCAACGAACGGTTACTCTATACGATTGGTGGCTCGTTAAATCTCAAAATGACATCCAAGGAAACTGTTTAGCCATCTCTGGCGTCTCTTCCAGAAAGGAAGAAGCAGTTCGTGTGTTCAATTCTGCTCCTATTATCAAAAGATTTGATGAGTTTTCCCTTGAGACTGCCGATGGTATATATGTTGTCATTAGGGGTTTCATCAACGAGCAACGCACGCTGGATAATGGTTTTACTTCCAAGATTTTCAAGAGTTTTTTATTTGGCTTTCCTCAAAACTGGGAGAGTTGTGCTCTAGGTTGTTTCAGAGAAGAAGCAGAAGCTGGTGCTTATTCGGTCAATGTTATGGATAATGTATCTGCAGTTTTTGAAGAAATCTCGGCTGACGGTGAGGAAAAATCCATTCCCACTTCGCCGATATTGCCTGAAGAGGCCCCAGAAAAGGGGATGAGTGGATTGGATGTTGCTTGTAGCAGGGGTGGAAATAGGCGTCGTAGCAGGTTGCATAATATTAATGTGTGTCAGCAGAAGAAGCAGAAGAAGCCGCATGCATCTAGAAGTCCTCTTAAGTGTCCCAATGAAGAATTGAGCTATACCTCCAAGGCTGTGGAAAATTGTAATTCGGGTACTGTTGTTCCTGACAATGTATCAACAAATCTTCTCGAAATCCCATCTAATGCCGTGGAAAATTCGTTCCCAACGTCTTTGGTAACACCGGAAAAGGCCATGAAAGATTGCAATAACTCATTCCTTGAAGAGGAACAAGATATGTCAATTAAGATGAGTGATATCAATGTTGTTCATGGTAGTGGCGGGAATAGGCGTAGTGGCCGGTTGCATAATGTTAAAGTCTGCCAGAAGCTGCAGCCTGTGTCTGGAGATCCTCTCAAGCATCCAGAGGAAGAGCAGAGCTCTACATTAAAGGCTGTGGAAAATCGTGATTATGATACTGCTGTTCCTGATAACGTATCAGCAAAACTTCCAGAAATACCATATGATGCTGTGGAAAAGTCTTTTCCTACTTCGGTATCACTGGATAAGACCACAGGAGAATGCAATAAGGCATTCCTTGAAGATGAACACGATATGTCAATCAAGACGGGTGACGTCAACGTTGTTCATGGTAGTAGTGCGAATAGACGTAGTGCCCGGTTGCATAATGTTAAACTCAACCAGAAGAAGCAACCTGCTATTGGAGGTTCTACAGCACATCCAGATAAAGACCAGATCTCTGCCTCAGCTGCTCTGGAGAAGAGTGATGGAAGACTGGAAACTCTATCGACACCCGTTCAGTCACAAAAGGGAATAGTAAACACATCATCTGGGAAGGTCACTAATAAATTCAGATCCAGAATTTCCAAAACTCCTTCAGCAAAAACTGAAGGATCGAGAATTTCCAAAACACCTTCAGCAAAAACTGAAGGATGTTATAAGAAAAAAAGGGCGACGGTTGAAAGAGAAGCTGTCAGGCCTAAGAAAAAAATTATTAAATCCGCATCTTCTGTAAAATCTCCACAAGGAAGTGATGTAAGCCAACTGAACAAGGGAAGTAAACAGAGATTATCCACAATGTCTCCTGAGTCCTTGAGTCTCAAAAAATCTAGATCTGGTAGGTTACTTCTACCTCCCTTGGAGTTTTGGCGCAATCAAATACCTATTTTTAATGGGGACCATGAAATTACAGAAATTCAGGAAGGCTCGTCCTTGAAATCACCTTTTTGA 1779 0.4227 MADSTPTASTSNGTPTYSCFQRTVTLYDWWLVKSQNDIQGNCLAISGVSSRKEEAVRVFNSAPIIKRFDEFSLETADGIYVVIRGFINEQRTLDNGFTSKIFKSFLFGFPQNWESCALGCFREEAEAGAYSVNVMDNVSAVFEEISADGEEKSIPTSPILPEEAPEKGMSGLDVACSRGGNRRRSRLHNINVCQQKKQKKPHASRSPLKCPNEELSYTSKAVENCNSGTVVPDNVSTNLLEIPSNAVENSFPTSLVTPEKAMKDCNNSFLEEEQDMSIKMSDINVVHGSGGNRRSGRLHNVKVCQKLQPVSGDPLKHPEEEQSSTLKAVENRDYDTAVPDNVSAKLPEIPYDAVEKSFPTSVSLDKTTGECNKAFLEDEHDMSIKTGDVNVVHGSSANRRSARLHNVKLNQKKQPAIGGSTAHPDKDQISASAALEKSDGRLETLSTPVQSQKGIVNTSSGKVTNKFRSRISKTPSAKTEGSRISKTPSAKTEGCYKKKRATVEREAVRPKKKIIKSASSVKSPQGSDVSQLNKGSKQRLSTMSPESLSLKKSRSGRLLLPPLEFWRNQIPIFNGDHEITEIQEGSSLKSPF 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00935 592 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 1 585 - -
Trre9g00935 592 MobiDBLite consensus disorder prediction 468 553 - -
Trre9g00935 592 MobiDBLite consensus disorder prediction 468 489 - -
Trre9g00935 592 Pfam SANTA (SANT Associated) 24 115 IPR015216 -
Trre9g00935 592 MobiDBLite consensus disorder prediction 518 551 - -
Trre9g00935 592 MobiDBLite consensus disorder prediction 492 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00935 Trre-Chr9 7198373 7201548 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Trre9g00935 SANTA 3.7e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00935 - - mtr:25484135 734.176