Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00932 ATGGAGGAATTCCTGCTCAAAACTCTCATTTCAAGCATTCTAACCTTGTTAATTGGAGCCTTAATTTATCACATAAAGAAAACACATGGTCAACGCCACACAACTGCACCTCAAGCAGGAGGATCATGGCCTATTATTGGCCATTTGCATCTTTTTGGTACTCAACAACTTACACACAAAACACTTGGTATGATGGCTGACAAACATGGACCAATTTTCACAATCAAACTTGGTTCATACAAAGTTCTTGTACTTAGTAGCAGTGAAATGGCCAAAGAATGTTTTACTCTCCATGACAAAACATTCTCCACTAGACCTTATGTTGCAGCCTCAAAGCTATTGGGTTACAATTCTGCTATGTTTGGATTCACTCCTTATGGTCCTTATTGGCGTGAGATAAGGAAGTTAACTACACACGAGCTTCTTTCGAACCACCGACTCGAACTGTTGAAGAACACAAGAGTATCTGTGTTAGATTCTGCGGTGAGAGAGCTTTATAGGTTATGGACAATAAAGGGTTGTCCAAAAGAAGGTGTTTTGGTTGATATGAAGCAGTGGTTTGGTGATTTGACACAAAGTATTGCTCTGAAAATGGTGGGAGGGAAGCCATATTATGGTACTGGTGGTGAAGGTGAAGCTAGGAAGTATAAGGAAGCTATGAGAGAGTGGGTATGTTTGTTTGGTGTGTTTGTGTTGTCTGATGCAATTCCATTTCTGGGTTGGTTAGATATTAATGGTCATGAGAAGGCTATGAAGAAAACTGCTAAGAAATTAGACACTCTGGTTGAAGGGTGGCTGGAGGAACACAAAAAGAAAAGAGCTTTGGGTAATAATGGAAAGGAAGAACAGGATTTCATGGATATCATGTTGGATGTTCTGCAGGATGCAGAGATTTGTGGTTATGATTCAGATACCATCATCAAGGCTACTTGCCTGAATCTGATTTTAGCAGGAAGTGACACCATCATGGTGGCTCTAATATGGGCACTGTCTCTATTACTCAATCATCCAATGGAACTTAAAAAGGCACAGGATGAGTTGAACACACATATTGAGAAGGACATAAAAGTGGAAGAATCTGACATAAAGAACTTAGTTTACCTCCAAGCCATTGTCAAGGAAACGCTGCGTCTCTATCCACCAAGTCCAATTATCGTCTTGCGATCAGCAATGAATGACTGCACTTTTTCATGTGGTTATCACATTCCTGCTGGTACACAGTTGATGGTGAATACTTGGAAGATCCACAGGGACAGTCGTGTTTGGACTGATCCTCATGAATTCAAGCCTGAGAGGTTTTTAACAAGCTACAAAGATGTTGATGTGAGAAGTCAAAACTATGAGCTTGTCCCTTTTGGTTCTGGAAGGAGAGTATGCCCTGGGGCCTCACTTGCTATGAGAGTGGTGCACTTGACATTGGCTAGACTGCTACACTCTTTCAATGTTGCTACTCCTTCCAATCAAGCTGTAGACATGACAGAAAGCCCTGGACTCACTAATTTAAAAGCAACCCCGCTTGAAGTTTTATTAACACCGCGCCTGGATACCAATCTTTATGAGTAG 1563 0.4127 MEEFLLKTLISSILTLLIGALIYHIKKTHGQRHTTAPQAGGSWPIIGHLHLFGTQQLTHKTLGMMADKHGPIFTIKLGSYKVLVLSSSEMAKECFTLHDKTFSTRPYVAASKLLGYNSAMFGFTPYGPYWREIRKLTTHELLSNHRLELLKNTRVSVLDSAVRELYRLWTIKGCPKEGVLVDMKQWFGDLTQSIALKMVGGKPYYGTGGEGEARKYKEAMREWVCLFGVFVLSDAIPFLGWLDINGHEKAMKKTAKKLDTLVEGWLEEHKKKRALGNNGKEEQDFMDIMLDVLQDAEICGYDSDTIIKATCLNLILAGSDTIMVALIWALSLLLNHPMELKKAQDELNTHIEKDIKVEESDIKNLVYLQAIVKETLRLYPPSPIIVLRSAMNDCTFSCGYHIPAGTQLMVNTWKIHRDSRVWTDPHEFKPERFLTSYKDVDVRSQNYELVPFGSGRRVCPGASLAMRVVHLTLARLLHSFNVATPSNQAVDMTESPGLTNLKATPLEVLLTPRLDTNLYE 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00932 520 SUPERFAMILY Cytochrome P450 42 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00932 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Trre9g00932 520 Pfam Cytochrome P450 37 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00932 520 Gene3D Cytochrome P450 26 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00932 520 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00932 520 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00932 520 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00932 520 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00932 520 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00932 520 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00932 520 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00932 520 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00932 520 FunFam Cytochrome P450 82C4 26 511 - -
Trre9g00932 520 CDD CYP82 70 513 - -
Trre9g00932 520 PANTHER CYTOCHROME P450 82C3-RELATED 14 519 - -
Trre9g00932 520 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00932 520 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00932 520 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g00932 520 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00932 Trre-Chr9 7182423 7184135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00932 8 519 Cytochrome P450 AT4G31940 50.383 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00932 - - gmx:606549 823.157