Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00929 ATGTCGTTTTCTTTGTTCTCCACTCCTCAGCAACCGCAACAACAACAATCACAACTATTTCAACCGCAACAACAACAACAACAATCTCCTTTTCAGCAGCAGAGTAATTTGTTCCAACAACAGCAACAATTTCAAGCGCAACAACAATTTCAAGCGCAGCAACAACAGCAACAGCAGCAGCAACAATTGTTTTTGTTCACTAATGATAGAACTCCGGCGAGTTACAGTACCAATTGGGCGGATCTACATCCTGATTCCCAGAAATATCTACTTCAGATCGAGGAACGGATATTGGAGTATAGAGATGAAAGTCAGAGACTTGATCAGTGTAATCGTCTTTATGATTCGTCTGTTTCCAACGATGGATTTGAAGTTGATGCAAGCCATATTGTTCAGGAACTTGGTGGAATCAGCACTGCTATGGAACGACAGAAAACTTTACTACAGGAACTGATGTCAGCTGTTAAGGATATGCTACGTAATACAGAGGTTGCTGTTCGTTCCTTTATGATGCTACGTCCAAGGTTCTTTCATCCCAGTGGGGGAGCATCAAGTGCCACTGCCCCATCACAGACCACTGGAGCCACAGCACCTAGTTCGAGTGTCCAACCACCATCTACATCTATAGTGCCTGTTTTTGATTTCTACAGTGGTCTTCCAAAGAAACCATCACCCTTTTTACAACAAACAGTTCTTAGATTTGAGAAATATCTTTGTGAATGTCATCAGTGGATTCAAGAGTTAGAGCAGCTGCTTCTCTTAGACTCTGAAAAAAACGGTTCCAGTAATGGATCCTCGTTATTGCAATCTCTTCCGAAAGTCATGACAAATGTGCATGACTTTTTTGTTCACGTGGCTGCAAAGGTAGAGAGCATTCACCAGTACATGGAATCTATGAAATCAGCATACCTAGCTGATCAGCGCCGCCGCGGGGAGGTGAATGATCCATTTCTAGAGGCTGATCGTCGAGAAACTGCACGGCAAGAAGCAGCATCAAAAAGAGTTCATCCAACATTGCATTTACCTGCAAATTCACAACCCTCAACTCAAGTTGCTGGGTTGTTTTCCAGTTCAGGAACTCAAGGAGCATTGACTTCCCAACAGACCGCTGCAACAACTTCATCTTTGTCAACAGGAAGTGGTTTATCTCTTTTTAGCACACCGACTTCTGCCCCATCATCATCATCTATGCCATCTTTGTTTACAACACCAACAACTCCTGCTCAAGGAACGTCATGGTTTGCATCATCTAGTTCTACGCCTCAACCACAATCCTCAATTTTTGGTTCTGCATCATCTTCCTTACCTGGTGCGACATCAACTCCCTCTCTGTTTGGTAATAATACTCCACTGTTTAATTCAACTCCGGCTGCAAGCTCACTCTTTTCAACTCCGTTTGCTTCAGGTGCTGCAACAGGATCAGGAGCAAGCTTTGGGGGATCCAAAAATCCACGGCCAAAATCCAGAACTGCTCGGCGCTAA 1482 0.4386 MSFSLFSTPQQPQQQQSQLFQPQQQQQQSPFQQQSNLFQQQQQFQAQQQFQAQQQQQQQQQQLFLFTNDRTPASYSTNWADLHPDSQKYLLQIEERILEYRDESQRLDQCNRLYDSSVSNDGFEVDASHIVQELGGISTAMERQKTLLQELMSAVKDMLRNTEVAVRSFMMLRPRFFHPSGGASSATAPSQTTGATAPSSSVQPPSTSIVPVFDFYSGLPKKPSPFLQQTVLRFEKYLCECHQWIQELEQLLLLDSEKNGSSNGSSLLQSLPKVMTNVHDFFVHVAAKVESIHQYMESMKSAYLADQRRRGEVNDPFLEADRRETARQEAASKRVHPTLHLPANSQPSTQVAGLFSSSGTQGALTSQQTAATTSSLSTGSGLSLFSTPTSAPSSSSMPSLFTTPTTPAQGTSWFASSSSTPQPQSSIFGSASSSLPGATSTPSLFGNNTPLFNSTPAASSLFSTPFASGAATGSGASFGGSKNPRPKSRTARR 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00929 493 MobiDBLite consensus disorder prediction 315 334 - -
Trre9g00929 493 MobiDBLite consensus disorder prediction 180 205 - -
Trre9g00929 493 MobiDBLite consensus disorder prediction 463 484 - -
Trre9g00929 493 MobiDBLite consensus disorder prediction 183 205 - -
Trre9g00929 493 Coils Coil 141 161 - -
Trre9g00929 493 Gene3D - 222 312 - -
Trre9g00929 493 PANTHER NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 5 481 IPR024882 GO:0005643|GO:0006913|GO:0008139|GO:0017056
Trre9g00929 493 MobiDBLite consensus disorder prediction 339 450 - -
Trre9g00929 493 MobiDBLite consensus disorder prediction 463 493 - -
Trre9g00929 493 MobiDBLite consensus disorder prediction 1 39 - -
Trre9g00929 493 MobiDBLite consensus disorder prediction 315 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00929 Trre-Chr9 7154096 7158748 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00929 15 493 NAC Transcription Factor Family AT4G37130 59.029 9.88e-177 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00929 K14307 - gmx:100776992 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g00929 9 7154096 7158748 Trre9g00929 9 7154096 7158748 ECH