Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00908 ATGGCGGATCTATTCAGTGGAGGTGCAGTTGGAGCATTGATGGGAGAAACACTGAAATACGGCATTCAGACGATAAAAAAAGGTCGAGAATTTCGTCCCACACTCAAAACAAACATAGAAACTTTAGATGCTTTGGTTCCATTGGTTGAAGAGATGAAAGGTTTCAATGATTTATTGGATCGACCGAGCGAAGAGATAGAGAGATTAGAAAAACATATGATAGAAGGTAAAGAGATTGTAGAAAAAAGTAAGAAACTTACTTGGAGAAAGTTTTTTTCATTTCCAAGTCAACAGGCTAAACTTAAGAAACAAGATGAGAAACTTAAGAGATATTTGTCTGTTAATGTTCAAGGTGAGAATAAAAGGGATTTGATGGATGTGTTGATTAAGGTGAATAGAATTTTTGAGATTCTTATGAAAAATTTGGGTCAATTTGATAGGAATCAAATTAGGGGTTTGTGTGGTGCTCCTGATGAGCCTCAATGTAAGGGAATGGTTGAGTCTTTAAGTAAGTTGAAGATTGAAATGATGAAAGATGGTGTTTCTGTGCTTGTTTTGACTGGTTTGGGTGGTTCAGGTAAAAGTACTCTTGCTAAGAAGCTTTGTTGGGATCCACAAATCAAAGGCAAGTTTGATGGAAACATCTTCTTTGTTACCGTCTCTAAAACTCCCAACTTGAAGAACATTGTACGGACACTATTTGAACACCGTGGACTTCGGGAGCCTGAATTTCAAAGCAACGAAGATGCAATTAACCGATTAGGACTTTTGCTGAAGCAAGTTGGTAGAAATCCAATGTTATTAGTCTTGGATGATGTTTGGCCTGGCTCTGAAAGCCTTGTTGAGAAGTTTAAATTTCAAATGTCAGATTATAAGATTTTGGTGACTTCAAGGGTTGCATTTAGAAGATTTGGCACCCCATTCCCATTGGAGCCACTTGATCTTGATCATGCTGTGTCCCTTTTTCATCACTTTGCTCAATTGAATCACAACAGCTCATACATGCCGGATAAAAATCTTGTCCGTGAGATAGCGAAAGGTTGTAAGGGTTCGCCGCTGGCGCTTCAGGTCATTGCTGGATCACTCTGTCAGCAGCCTCTTGAAAAGTGGAAAAATATGAAGGAATTTTTTCAAAATCAATCCATTCTAGAGTCTCAAAGATATTTTCCGAGTGATAGCTTTGACACTGACTTGCTTTGTCGCCTTCAACAAAGTTTGGATATATTGGAGGATATCAATGAGAAGGAGTGCTTTGTGGATCTAGGGCTATTTCCTGAAGACCAGAGGATCCCTGTTACTGCCCTCATCGATATGTGGGCGACACTGTACAACCTAGATGAAGATGGTACAAAAGCAATGGTCATTGTCCATGATTTAAACACTAGGAATTTGATTAATGTCATAGCTACAAGGAAAGTTGCGACAGAAACAGACATGTACTACAATAACCACTATGTCATGATGCATGATCTCCTCAGAGAACTAGCGATTCATCAAAGCAAAGGGGAACCATTTGAACAGAGAAAAAGATTGATCATTGACTTGAATGGAAATGATCGTCCCGATTGGTGGATAGGACCGAATCAGGAAGGAATACTTAGTCGTATGCACTCATTCGTTGCTGGATTGTTGGTAAAACAGAAACAACTAAAGGTTGATGCCCGTATATTGTCTATATCAACTGATGAAACATTTTCTTCGGATTGGTGTGACATTCAACCTGATGAAGCTGAGGTTCTCATTTTGAATCTTCGGTCTGACCAGTACTCATTACCAGATTTCATCAAAAAAATGAGTAAACTTGAAGTTTTAATAGTCACAAATTATGGTTTCAATCATTCTGAATTAACAAAGTTTGAGCTACTCAGTTTTTTATCAAACTTGAAAAGAATAAGGTTGGAGAAAGTTTCTGTACCTTGCCTATGCAAATTGAAGAATCTGCAGAAATTATCCCTTCACATGTGCAATACAAGGAATGCTTTTGAAAGCTGTTCTATCCAAATTTCAGATGCGATGCCAAATCTAGTGGAGTTGAGCATTGACTATTGTAAAGATTTGATTAAATTGCCTGATGGGTTGTGTAACATAACCACATTGAAGAAGCTCAGTATCACCAACTGCCACAATCTTTCTGCAATGCCTCAAGATATTGGAAAGCTGGAGAATTTGGAAGTGCTAAGGCTTTGTTCCTGTTCTGATTTAAAAGAGATTCCGAAATATGTTGCAGGCCTTAACAAGCTATGTTGTCTCGACATCTCAAACTGTGTGAGTCTTTCAAAATTACCTAAAGATATCGGTGAGTTGCAAAAGCTTGAGAAGCTCTCAATGAAGGGTTGCTCAAACTTGAGTGGATTGCCTTATTCTGTCATCAAATTTGGAAATTTAAAACATGAAATGCATGTGATATGTGATGAAGAACGTGTTGCCTTATGGGAACAGTATCCCAACATTCCCAATCTGAGGATAGATATGCATAATGAAGATATTAATTTAAATTGGCTTCACAGAACTCGTTCCTAA 2520 0.3806 MADLFSGGAVGALMGETLKYGIQTIKKGREFRPTLKTNIETLDALVPLVEEMKGFNDLLDRPSEEIERLEKHMIEGKEIVEKSKKLTWRKFFSFPSQQAKLKKQDEKLKRYLSVNVQGENKRDLMDVLIKVNRIFEILMKNLGQFDRNQIRGLCGAPDEPQCKGMVESLSKLKIEMMKDGVSVLVLTGLGGSGKSTLAKKLCWDPQIKGKFDGNIFFVTVSKTPNLKNIVRTLFEHRGLREPEFQSNEDAINRLGLLLKQVGRNPMLLVLDDVWPGSESLVEKFKFQMSDYKILVTSRVAFRRFGTPFPLEPLDLDHAVSLFHHFAQLNHNSSYMPDKNLVREIAKGCKGSPLALQVIAGSLCQQPLEKWKNMKEFFQNQSILESQRYFPSDSFDTDLLCRLQQSLDILEDINEKECFVDLGLFPEDQRIPVTALIDMWATLYNLDEDGTKAMVIVHDLNTRNLINVIATRKVATETDMYYNNHYVMMHDLLRELAIHQSKGEPFEQRKRLIIDLNGNDRPDWWIGPNQEGILSRMHSFVAGLLVKQKQLKVDARILSISTDETFSSDWCDIQPDEAEVLILNLRSDQYSLPDFIKKMSKLEVLIVTNYGFNHSELTKFELLSFLSNLKRIRLEKVSVPCLCKLKNLQKLSLHMCNTRNAFESCSIQISDAMPNLVELSIDYCKDLIKLPDGLCNITTLKKLSITNCHNLSAMPQDIGKLENLEVLRLCSCSDLKEIPKYVAGLNKLCCLDISNCVSLSKLPKDIGELQKLEKLSMKGCSNLSGLPYSVIKFGNLKHEMHVICDEERVALWEQYPNIPNLRIDMHNEDINLNWLHRTRS 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00908 839 Gene3D - 402 499 IPR036388 -
Trre9g00908 839 Gene3D Ribonuclease Inhibitor 555 807 IPR032675 -
Trre9g00908 839 Gene3D - 156 302 IPR027417 -
Trre9g00908 839 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 2 131 IPR008808 -
Trre9g00908 839 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 167 421 IPR027417 -
Trre9g00908 839 ProSiteProfiles RPW8 domain profile. 1 150 IPR008808 -
Trre9g00908 839 Gene3D - 313 392 IPR042197 -
Trre9g00908 839 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 2 834 IPR039203 GO:0050832
Trre9g00908 839 PRINTS Disease resistance protein signature 766 782 - -
Trre9g00908 839 PRINTS Disease resistance protein signature 348 362 - -
Trre9g00908 839 PRINTS Disease resistance protein signature 183 198 - -
Trre9g00908 839 PRINTS Disease resistance protein signature 260 274 - -
Trre9g00908 839 SUPERFAMILY RNI-like 588 797 - -
Trre9g00908 839 Pfam NB-ARC domain 170 383 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00908 Trre-Chr9 7028671 7032470 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00908 188 818 WRKY Transcription Factor Family AT5G45050 23.256 3.41e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00908 - - gmx:100792590 1162.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g00908 9 7028671 7032470 Trre15g03928 15 49212143 49213698 PCT