Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00896 ATGCGGTGGTTGCCAACCCTAATTTTCTCTCCTTCTTCTTCTTCTTCCTCTTCCTCTTCCGTTTCTCATTCTCATTCTTCAATCGCTTCTTCATCTTCCTCCGCTACATCTCCTTCAACGGTTAAATCACCTCCTCCTAATTCTTCTTCCTCAGATACCTCCGAACGAAGAAAAAGTACAGGCAGCACGTGGTTTTTTGGTGCTGGTAAAAGATCGACGCGATCAAGGAAGCTACGTAATGTCGACGATGATCATGTTGAATACGACGTCGTTACGACAGCAGCGCCGATTACTCGTTCTCCGAGTGCACGGAGTTATATTCGGTCTAATACTTCTGTTGCGCCTCAACCGTTGCCATTGCCGGAGTTAGCTTTAGCGTCTTCTGTTGTCAGACCTAGAGATGCTGATTGTCGTTTGCCGTCGCCTAAAGAAGCTTCCGGTAAAGCCGAAGCTTCCGGTAGAGCGGATCCTGAGGTCAATGTTGTCATTGGTTCTCTTTCTACTGGATTTAAAATGCGCAGTGTTTTTGCTAGCCAAGATACAAGAAGGAATACAGAGCATATGGAGACAAGGCCACCAGGGAATGCGATGGCGCGTCAAGATACAAGTGGTGCTGAAACTCCAAGTTTTCGAGGAAATAGTTTCCGGATAAGTGTCCCTCCAAGGAGTGCTTCAAACAGTCCGTTTACAAGTCCCACAATCAGCCCACATAACAGCAAACATGATGACTTTGTGCCATATTATTATGTGTCACCCAAAGCAAATCATTTCTGGTCTGCACCAGAAATGCCAACATCTTCAGGGCAACCTCCTCCTGCTTTCTTTGATTTATCTGCATTAGGCATTGATTGTGCCACTTCTCCCCAACAAAGTTCAGGGGGAAAAAGTCCCAGACAACAAAATCCAAAAAGCCCAACTAGACCTTCTTCACCCCTACCAAGGCTGTCCCTTGACTTCGCAACAACTACACGTCGTGAAAGTCTTGCTCCTCTTCTCAGTGTTCATCCTTTACCCTTGCCTCCTTGGCCCGGGACTTCCTTACCTTCACCCTCTGGTACATATTCCCAGCCTGGGGGGGCTAAGACAGAATCCGTATCTATGAAAAGTCAATGGCAAAAGGGTAAACTTATAGGGCGAGGTACCTTTGGAAGTGTTTATGTTGCCACTAATAGAGAAACTGGAGCATTGTGTGCAATGAAGGAAGCAGAAATATTTTCTGATGATCCAAAATCTGCCGAGAGTATAAAGCAGTTAGAACAGGAAATCAAAGTTCTTAGCCAGCTGAAACATCCAAACATTGTGCAGTATTATGGTAGTGAAATAATAGAGGACAAGTTTTATATTTATTTGGAGTTTATCCATCCTGGTTCAATAAATAAATATGTCCGTGACCACTGTGGTGCGGTAACAGAATCCGTTGTTCGGAATTTCACACGACATATTCTTTCGGGGTTGGCTTACTTGCACAGCAAAAAGACAATTCATAGGGATATCAAAGGGGCTAACTTGCTTGTTGATTCTTCTGGTGTTGTTAAGCTTGCTGATTTTGGGATGGCCAAGCATCTAACTGGTCATTCTGCTGATCTGTCTTTGAAAGGAAGTCCATACTGGATGGCTCCAGAGCTAATGCAAGCGGTCATACATAAAGATAACAACTCTGATCTAGCTTTTGCTATTGATATTTGGAGTTTGGGTTGTACAATCATTGAAATGTTCACGGGGAAGCCTCCATGGAGTGAATATGAAGGAGCTGCAGCTATGTTTAAGGTAATGAAGGATACCCCTGCTATACCTGAAACTTTGTCACCAGAAGGTAAAGATTTCTTGAGGCTTTGCTTTAAAAGAAATCCAGCAGAGCGGCCAACTGCTACAATGTTACTAGAGCATCGGTTTCTGAAAAACTTACAACATTCAGATCCTTCACCTTCCTCCCATCTGTACAATGGAACAACCTTAATGGATAAACCCCATAGTCCCAGAGGGTTATTAGAAAACAAACCTGATCAATTTTCTATTGTCAGTGCACAGATTGCAAAAGGGAAATCTTCCATTGAGAGTGGCATGACAATGTCCTACTCGCTCTACTCTTGA 2091 0.4381 MRWLPTLIFSPSSSSSSSSSVSHSHSSIASSSSSATSPSTVKSPPPNSSSSDTSERRKSTGSTWFFGAGKRSTRSRKLRNVDDDHVEYDVVTTAAPITRSPSARSYIRSNTSVAPQPLPLPELALASSVVRPRDADCRLPSPKEASGKAEASGRADPEVNVVIGSLSTGFKMRSVFASQDTRRNTEHMETRPPGNAMARQDTSGAETPSFRGNSFRISVPPRSASNSPFTSPTISPHNSKHDDFVPYYYVSPKANHFWSAPEMPTSSGQPPPAFFDLSALGIDCATSPQQSSGGKSPRQQNPKSPTRPSSPLPRLSLDFATTTRRESLAPLLSVHPLPLPPWPGTSLPSPSGTYSQPGGAKTESVSMKSQWQKGKLIGRGTFGSVYVATNRETGALCAMKEAEIFSDDPKSAESIKQLEQEIKVLSQLKHPNIVQYYGSEIIEDKFYIYLEFIHPGSINKYVRDHCGAVTESVVRNFTRHILSGLAYLHSKKTIHRDIKGANLLVDSSGVVKLADFGMAKHLTGHSADLSLKGSPYWMAPELMQAVIHKDNNSDLAFAIDIWSLGCTIIEMFTGKPPWSEYEGAAAMFKVMKDTPAIPETLSPEGKDFLRLCFKRNPAERPTATMLLEHRFLKNLQHSDPSPSSHLYNGTTLMDKPHSPRGLLENKPDQFSIVSAQIAKGKSSIESGMTMSYSLYS 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00896 696 MobiDBLite consensus disorder prediction 7 69 - -
Trre9g00896 696 MobiDBLite consensus disorder prediction 1 83 - -
Trre9g00896 696 FunFam Mitogen-activated protein kinase kinase kinase 5 368 669 - -
Trre9g00896 696 MobiDBLite consensus disorder prediction 284 315 - -
Trre9g00896 696 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 14 644 - -
Trre9g00896 696 MobiDBLite consensus disorder prediction 348 366 - -
Trre9g00896 696 Pfam Protein kinase domain 372 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g00896 696 ProSiteProfiles Protein kinase domain profile. 371 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g00896 696 MobiDBLite consensus disorder prediction 196 213 - -
Trre9g00896 696 ProSitePatterns Protein kinases ATP-binding region signature. 377 400 IPR017441 GO:0005524
Trre9g00896 696 MobiDBLite consensus disorder prediction 284 303 - -
Trre9g00896 696 MobiDBLite consensus disorder prediction 180 213 - -
Trre9g00896 696 SMART serkin_6 371 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g00896 696 MobiDBLite consensus disorder prediction 218 237 - -
Trre9g00896 696 MobiDBLite consensus disorder prediction 134 154 - -
Trre9g00896 696 SUPERFAMILY Protein kinase-like (PK-like) 366 659 IPR011009 -
Trre9g00896 696 MobiDBLite consensus disorder prediction 339 366 - -
Trre9g00896 696 Gene3D Transferase(Phosphotransferase) domain 1 367 655 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00896 Trre-Chr9 6932255 6936806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00896 66 689 MAP Kinase Kinase Kinase AT5G66850 54.726 0.0 604
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Trre9g00896 Pkinase 5.8e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00896 - - psat:127120353 1038.48