Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00895 ATGTTCTATCTTGTGTTTCTTACTCCACTTGTGTGCTCTCAACTTAATTACAACTTCTATATCAAAACTTGTCCAAACCTAAACAGAATTGTTAAAGACAATGTATTGTCAGCCATAGCCAATGACTCAAGGATTGCTGCATCTCTCCTTCGTCTTCATTTCCATGATTGTTTTGTTAATGGGTGTGATGGATCTGTGCTACTGGATGATACAGACACACTAAAAGGGGAGAAAAATGCACTGCCTAATAAAAATTCATTAAGAGGATTTGATGTAATTGATAAAATAAAGTCAGATTTAGAGAATGCTTGTCCATCTATAGTGTCATGTGCTGATATACTTGCTCTAGCAGCCAGAGAAGCTGTGTATCTAAGTAGGGGGCCATTTTGGTTTGTACCTCTTGGTCGTAGAGATGGCATAACAGCAAGTGAGAGTGAGGCAAATAACTTGCCATCACCTTTTGATACTTTAGATAAAATTACTGCCAAGTTCATTTCCAAGGGTCTTGAAAAGAAGGATGTAGCTGTTCTCTCAGGTGCACACACTTTTGGCTTCGCTCAATGTGTTACATTCAAGACAAGGCTATTCAACTTTAATGCCTCTTTCAAATCTGATCCATCACTTGATTCATCTCTTCTACAAAATTTGCAAAAACTATGTCCAAATGAAGCTAATTCCGACACCAATTTAGCACCTTTGGATCCTGTCACTACAAACATATTTGATAACACATATTACAAAAATGTTATGAGCAATTCTGCGTTACTTCAATCAGACCAAGCTCTTTTGGGTGACAATACAATTGTTTCCTTGGTTACCAACTATAGCAAGTGCCCTTTTGAGTTTTTTAGAGACTTTGCGGTTTCTATTGAGAAAATGGGTCGCATTGGTGTTCTTACTGGACAACAGGGTCAAATAAGGAAAAATTGTAGGGTTGTTGGCTAA 945 0.3757 MFYLVFLTPLVCSQLNYNFYIKTCPNLNRIVKDNVLSAIANDSRIAASLLRLHFHDCFVNGCDGSVLLDDTDTLKGEKNALPNKNSLRGFDVIDKIKSDLENACPSIVSCADILALAAREAVYLSRGPFWFVPLGRRDGITASESEANNLPSPFDTLDKITAKFISKGLEKKDVAVLSGAHTFGFAQCVTFKTRLFNFNASFKSDPSLDSSLLQNLQKLCPNEANSDTNLAPLDPVTTNIFDNTYYKNVMSNSALLQSDQALLGDNTIVSLVTNYSKCPFEFFRDFAVSIEKMGRIGVLTGQQGQIRKNCRVVG 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00895 314 Pfam Peroxidase 32 276 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g00895 314 ProSitePatterns Peroxidases proximal heme-ligand signature. 173 183 IPR019793 -
Trre9g00895 314 Gene3D Peroxidase, domain 2 151 293 - -
Trre9g00895 314 FunFam Peroxidase 151 293 - -
Trre9g00895 314 SUPERFAMILY Heme-dependent peroxidases 14 313 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre9g00895 314 PRINTS Haem peroxidase superfamily signature 234 249 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g00895 314 PRINTS Haem peroxidase superfamily signature 108 125 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g00895 314 PRINTS Haem peroxidase superfamily signature 173 188 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g00895 314 PRINTS Haem peroxidase superfamily signature 126 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g00895 314 PRINTS Haem peroxidase superfamily signature 46 60 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g00895 314 ProSitePatterns Peroxidases active site signature. 46 57 IPR019794 GO:0004601
Trre9g00895 314 FunFam Peroxidase 18 167 - -
Trre9g00895 314 CDD secretory_peroxidase 14 313 IPR033905 GO:0004601|GO:0042744
Trre9g00895 314 Gene3D - 18 313 - -
Trre9g00895 314 PRINTS Plant peroxidase signature 88 101 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g00895 314 PRINTS Plant peroxidase signature 107 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g00895 314 PRINTS Plant peroxidase signature 126 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g00895 314 PRINTS Plant peroxidase signature 288 301 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g00895 314 PRINTS Plant peroxidase signature 24 43 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g00895 314 PRINTS Plant peroxidase signature 172 184 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g00895 314 PRINTS Plant peroxidase signature 48 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g00895 314 PRINTS Plant peroxidase signature 232 247 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g00895 314 PRINTS Plant peroxidase signature 248 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g00895 314 PANTHER PEROXIDASE 72-RELATED 12 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g00895 314 ProSiteProfiles Plant heme peroxidase family profile. 14 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00895 Trre-Chr9 6922466 6924653 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00895 11 314 Peroxidase AT1G49570 61.238 1.91e-131 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00895 K00430 - gmx:100815708 495.738