Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00864 ATGGCCACCACTCCTCCCTCCTCCTCCTCCTCACCACCAAAACTACTCACCGCAACCGTTTCCTCACTCACAAAAAAACCCCAACCCATCCCATGGACTCATCAAGAAACAATTAACCTCATCAGAGCTTATCAAGAGAAATGGTACTCTCTCAAACGTGGTCCACTTCGCGGCAGTCAATGGGAAGAAGTTGCTGTTGTAGTCGCCGCTAGATGTGGTTACGATTACAATCATCCTTCTAAAACTGCTCTTCAATGTCGTCATAAGATGGAAAAACTCCGTCAACGTCACCGATCTGAAAAACACCGTCTCACTGCTACTTCTTCTGCTGTTTCTTCCCGATCTTGGCAGTATTTTCGTCTTATGGATGATCTTGAACGTGGTCCTCTTCCTATCTCAGCTCGACCTGTTCTTCATAATTTCCCTATCTCTGATGATGATGATGATGATAGTGATGGTGAGAGACGGAAAAAGCGTAGTGTTAGGTCAAGGAGTATGAATAATATTCTTAACCAGAAACCAGTTCTTACAAGACAACGTGTTGAAATTGATGATGATGAGGAGGAGGAAGATGAGGATGATGATGAAGAGGAAGAAGAAGGAGTGATGATGGTGAAGGGGTTGACGGCGGAGTTAAGAGGTTTTGCTGAGAGGATTGTTGGGTTGGAAAATAGGAAGATGGAGATGATGAAAGAAACTGAAAGGTTTAGATTGGAGATGGAGAATAAGAGGCTTCGTATGATACTTGAATCTCAGTGGAAGATTGTTGATTCCATTGGAAAAGCATTTGGGTCTTCATAG 801 0.4345 MATTPPSSSSSPPKLLTATVSSLTKKPQPIPWTHQETINLIRAYQEKWYSLKRGPLRGSQWEEVAVVVAARCGYDYNHPSKTALQCRHKMEKLRQRHRSEKHRLTATSSAVSSRSWQYFRLMDDLERGPLPISARPVLHNFPISDDDDDDSDGERRKKRSVRSRSMNNILNQKPVLTRQRVEIDDDEEEEDEDDDEEEEEGVMMVKGLTAELRGFAERIVGLENRKMEMMKETERFRLEMENKRLRMILESQWKIVDSIGKAFGSS 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00864 266 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 11 258 IPR044823 -
Trre9g00864 266 FunFam Trihelix transcription factor ASIL2 32 99 - -
Trre9g00864 266 MobiDBLite consensus disorder prediction 183 201 - -
Trre9g00864 266 Gene3D - 32 99 - -
Trre9g00864 266 ProSiteProfiles Myb-like domain profile. 31 94 IPR001005 -
Trre9g00864 266 MobiDBLite consensus disorder prediction 136 201 - -
Trre9g00864 266 Pfam Myb/SANT-like DNA-binding domain 31 125 IPR044822 -
Trre9g00864 266 Coils Coil 205 225 - -
Trre9g00864 266 SMART 118neu2 39 130 IPR006578 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00864 Trre-Chr9 6670751 6671551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00864 32 144 Trihelix Transcription Factor Family AT3G14180 29.752 1.50e-10 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Trre9g00864 Myb_DNA-bind_4 1.5e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00864 - - mtr:11405483 363.999