Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g00831 ATGGGTTGGGTTCGTGGTCACTTGTTAGGTAGCGGCAGCTTTGCCACCGTCAACTTAGCTACACACACAAACAATTCCGATAACTTTCCGTCTATTACCGCCGTCAAATCCTCCGATACTTACTATTCTCATCTTCTCCAAAATGAGAAACAAATACTTGATCGTTTAGGATCTTCTCCGCATGTTATCAATTGCTTTGGCGACGATAACACTTTTGAAGACGGCGAAGAGTGTTATAATATCTTTCTAGAATATGCCTCTGGTGGTACTCTCTTTGATCAACTCAAGAATTACGGTGGTAAGTTACCAGAAACCGTTGTTCGTCGTTACACGAGGTCTATCCTTGAAGGACTTAAACATGTTCATGAAAACGGTTTTGTTCACTGTGACGTGAAGCTACAAAACATTCTTGTATTTGAAGATGGCAATGTTAAGATTTCGGATTTTGGTCTTGCAAAGGAGAAAGGTTTAAAGAATGATGGAAAATTGGAATGCAGGGGAACTCCGATGTTTATATCGCCGGAAGCAGTGAACGACAATGTTTATGAATCGCCGGCAGACATATGGGCACTTGGTTGCGCGGTAGTGGAGATGGTTACGGGAAAACCTGCATGGAATTTTAGTGGGTCAAATATATGGTCCTTGTTGATTAGAATTGGGGTAGGAGAAGAATTGCCATTGATTCCCGAAGAATTTTCACAAGAAGGAAAAGATTTTCTTCAAAAAATATTCGTGAAGGATCCGTTGAAAAGATGGACAGCAGAGATGCTTTTGAAACACCCTTTTATCTCCGATGATAAAAATGTATCATTGGTGAAAGAGTTAATTAATGAGTCGTCGTCATTGCCATCACCATCATCTCCAAGAACACACTTTGATTTTCCTATAGAATTTGAGCATGATTTTTGTCCGCCGGAAGAGAGCTTCAACGACTAG 936 0.406 MGWVRGHLLGSGSFATVNLATHTNNSDNFPSITAVKSSDTYYSHLLQNEKQILDRLGSSPHVINCFGDDNTFEDGEECYNIFLEYASGGTLFDQLKNYGGKLPETVVRRYTRSILEGLKHVHENGFVHCDVKLQNILVFEDGNVKISDFGLAKEKGLKNDGKLECRGTPMFISPEAVNDNVYESPADIWALGCAVVEMVTGKPAWNFSGSNIWSLLIRIGVGEELPLIPEEFSQEGKDFLQKIFVKDPLKRWTAEMLLKHPFISDDKNVSLVKELINESSSLPSPSSPRTHFDFPIEFEHDFCPPEESFND 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g00831 311 Pfam Protein kinase domain 5 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g00831 311 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 280 - -
Trre9g00831 311 Gene3D Transferase(Phosphotransferase) domain 1 3 291 - -
Trre9g00831 311 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Trre9g00831 311 SUPERFAMILY Protein kinase-like (PK-like) 3 291 IPR011009 -
Trre9g00831 311 ProSiteProfiles Protein kinase domain profile. 3 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g00831 311 CDD STKc_MAPKKK 3 263 - -
Trre9g00831 311 SMART serkin_6 3 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g00831 311 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g00831 Trre-Chr9 6428531 6429466 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g00831 1 288 MAP Kinase Kinase Kinase AT3G50310 55.150 5.29e-114 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Trre9g00831 Pkinase 3.7e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g00831 - - gmx:100782937 435.261